Klebsiella pneumoniae Kp8 |
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Putative Klebsiella pneumoniae Kp8 RM systems
Ref: Kopotsa,K. et al. unpublished
REBASE ref # 31011
Contig set: 5,734,868 bp
GenBank #: VXJB00000000 (NZ_VXJB00000000)
REBASE acronym: KpnKKp38
Org_num: 43042
All begin F3Y20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13480 | 167 aa hypothetical protein | |||
| 13485 | R | KpnsST307aORF23170P (100% identity) | KpnKKp38ORF13485P | |
| 13490 | restriction endonuclease subunit S | |||
| 13485 | HsdR family type I site-specific | |||
| 13490 | S | S.KpnsST307aORF23170P (100% identity) | S.KpnKKp38ORF13495P | |
| 13495 | M | M2.KpnPT04ORF23310P (100% identity) | M2.KpnKKp38ORF13495P | |
| 13500 | M | M1.KpnstKP6ORF18380P (100% identity) | M1.KpnKKp38ORF13495P | |
| 13505 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1205 | 3-5 exoribonuclease | |||
| 1210 | M | M.KpnsST307ORF16130P (100% identity) | M.KpnKKp38ORF1210P | |
| 1215 | 91 aa hypothetical protein | |||
| 1220 | replication endonuclease | |||
| 1225 | M | M.KpnsST307ORF16100P (100% identity) | M.KpnKKp38ORF1225P | |
| 1230 | helix-turn-helix transcriptional regulator | |||
| 27815 | 103 aa hypothetical protein | |||
| 27820 | M | M.Kpn2398ORF330080P (100% identity) | M.KpnKKp38ORF27820P | |
| 27825 | winged helix-turn-helix domain-containing | |||
| 3260 | phosphohydrolase | |||
| 3265 | M | M.KspC31ORFBP (100% identity) | CCWGG | M.KpnKKp38DcmP |
| 3270 | V | V.Ksp2N3ORFEP (75% identity) | V.KpnKKp38DcmP | |
| 3275 | drug/metabolite exporter YedA | |||
| 26170 | resolvase | |||
| 26175 | R | YpsR1ORFAP (100% identity) | CCWGG | KpnKKp38ORF26180P |
| ??? | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.KpnKKp38ORF26180P |
| 26185 | IS1 family transposase | |||
| 7425 | replication endonuclease | |||
| 7430 | M | M.Kpni307zORF3341P (100% identity) | GATC | M.KpnKKp38ORF7430P |
| 7435 | TraR/DksA family transcriptional regulator | |||
| 9890 | YqaJ viral recombinase family protein | |||
| 9895 | M | M.Kpni307wORF3762P (100% identity) | M.KpnKKp38ORF9895P | |
| 9900 | dcm methylase | |||
| 13360 | glycoside hydrolase family 43 protein | |||
| 13365 | R | KpnstKP6ORF18305P (100% identity) | KpnKKp38ORF13365P | |
| 13370 | 677 aa hypothetical protein | |||
| 18410 | cell division protein DamX | |||
| 18415 | M | M.KpnstKP6DamP (100% identity) | GATC | M.KpnKKp38DamP |
| 18420 | ribulose-phosphate 3-epimerase | |||
| 24260 | helix-turn-helix domain-containing protein | |||
| 24265 | M | M.KpnstKP6ORF2850P (100% identity) | M.KpnKKp38ORF24265P | |
| 24270 | RusA family crossover junction | |||