Escherichia fergusonii RHB32-C05 |
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Putative Escherichia fergusonii RHB32-C05 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,697,820 bp | CP057243 |
| plasmid pRHB32-C05_2: | 147,532 bp | CP057244 |
| plasmid pRHB32-C05_3: | 116,001 bp | CP057245 |
| plasmid pRHB32-C05_4: | 91,854 bp | CP057246 |
REBASE acronym: Efe32C05
Org_num: 43213
All begin HVY96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19400 | restriction endonuclease | |||
| 19405 | M | M.Efe65411ORF19250P (100% identity) | M.Efe32C05ORF19405P | |
| 19410 | restriction endonuclease subunit S | |||
| 19415 | IS1 family transposase | |||
| 19420 | 116 aa hypothetical protein | |||
| 19425 | R | Efe33C07ORF19490P (100% identity) | Efe32C05ORF19405P | |
| 19430 | S | S.Efe33C07ORF19490P (100% identity) | S.Efe32C05ORF19405P | |
| 19435 | N-6 DNA methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1325 | bifunctional isocitrate dehydrogenase | |||
| 1330 | M | M.EfeC18ORF680P (100% identity) | M.Efe32C05ORF1330P | |
| 1335 | glyoxylate bypass operon transcriptional | |||
| 5170 | 145 aa hypothetical protein | |||
| 5175 | M | M.Sen21974ORF23385P (100% identity) | M.Efe32C05ORF5175P | |
| 5180 | 71 aa hypothetical protein | |||
| 17435 | DUF1317 family protein | |||
| 17440 | M | M.Sbo812ORFAP (100% identity) | M.Efe32C05ORF17440P | |
| 17445 | cell division protein ZapA | |||
| 20215 | DNA-binding transcriptional regulator Fis | |||
| 20220 | M | M.EfeTORF37040P (100% identity) | M.Efe32C05ORF20220P | |
| 20225 | DUF2556 family protein | |||
| 20740 | ribulose-phosphate 3-epimerase | |||
| 20745 | M | M.EfeTDamP (100% identity) | M.Efe32C05DamP | |
| 20750 | cell division protein DamX | |||
| plasmid pRHB32-C05_2 | ||||
| 23490 | 73 aa hypothetical protein | |||
| 23495 | M | M.Sen4346ORF22715P (100% identity) | M.Efe32C05ORF23495P | |
| 23500 | 89 aa hypothetical protein | |||
| plasmid pRHB32-C05_3 | ||||
| 23885 | 103 aa hypothetical protein | |||
| 23890 | M | M.Efe42C24ORF22300P (100% identity) | SAY | M.Efe32C05ORF23890P |
| 23895 | 73 aa hypothetical protein | |||
| plasmid pRHB32-C05_4 | ||||
| 24715 | 156 aa hypothetical protein | |||
| 24735 | M | M.EcoR42ORF22695P (98% identity) | M.Efe32C05ORF24735P | |
| 24740 | recombination-associated protein RdgC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB32-C05_4 | ||||
| 24480 | modulator protein | |||
| 24485 | M | M.EcoE2855ORF5630P (99% identity) | M.Efe32C05ORF24485P | |
| 24490 | R | EcoE2855ORF5630P (99% identity) | Efe32C05ORF24485P | |
| 24495 | maturation control protein | |||