Escherichia coli RHB37-C16 |
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Putative Escherichia coli RHB37-C16 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,076,588 bp | CP057115 |
| plasmid pRHB37-C16_2: | 104,255 bp | CP057116 |
REBASE acronym: Eco37C16
Org_num: 43156
All begin HVZ63_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | cell division protein DamX | |||
| 1700 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco37C16DamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 2250 | DUF2556 family protein | |||
| 2255 | M | M.Eco37C20ORF2255P (100% identity) | ATGCAT | M.Eco37C16ORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 4070 | conjugal transfer protein TraG N-terminal | |||
| 4075 | M | M2.EcoA41ORF21415P (100% identity) | GGCGGA | M1.Eco37C16ORF4075P |
| ??? | M | M1.EcoA41ORF21415P (99% identity) | GGCGGA | M2.Eco37C16ORF4075P |
| 4085 | R | EcoA41ORF21415P (97% identity) | GGCGGA | Eco37C16ORF4075P |
| 4090 | transposase | |||
| 5915 | TraR/DksA family transcriptional regulator | |||
| 5920 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.Eco37C16ORF5920P |
| 5925 | replication endonuclease | |||
| 9395 | phosphohydrolase | |||
| 9400 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.Eco37C16DcmP |
| 9405 | V | V.Eco37C20DcmP (100% identity) | V.Eco37C16DcmP | |
| 9410 | drug/metabolite exporter YedA | |||
| 15405 | 92 aa hypothetical protein | |||
| 15410 | M | M.Lsp2021ORF20390P (100% identity) | M.Eco37C16ORF15410P | |
| 15415 | TrmB family transcriptional regulator | |||
| 21185 | IS3 family transposase | |||
| 21190 | M | M.EcoSE11DndBP (100% identity) | M.Eco37C16DndBP | |
| 21195 | DNA phosphorothioation system sulfurtransferase | |||
| 21190 | DNA sulfur modification protein DndB | |||
| 21195 | M | M.EcoSE11DndCP (100% identity) | M.Eco37C16DndCP | |
| 21200 | DNA sulfur modification protein DndD | |||
| 21195 | DNA phosphorothioation system sulfurtransferase | |||
| 21200 | M | M.EcoMc31DndDP (100% identity) | M.Eco37C16DndDP | |
| 21205 | DNA sulfur modification protein DndE | |||
| 21200 | DNA sulfur modification protein DndD | |||
| 21205 | M | M.EcoSE11DndEP (100% identity) | M.Eco37C16DndEP | |
| 21210 | 206 aa hypothetical protein | |||
| 21215 | restriction endonuclease | |||
| 21220 | R | EcoSE11DptHP (99% identity) | Eco37C16DptHP | |
| 21225 | DNA phosphorothioation-dependent restriction | |||
| 21220 | DNA phosphorothioation-dependent restriction | |||
| 21225 | R | EcoSE11DptGP (100% identity) | Eco37C16DptGP | |
| 21230 | DNA phosphorothioation-dependent restriction | |||
| 21225 | DNA phosphorothioation-dependent restriction | |||
| 21230 | R | EcoSE11DptFP (100% identity) | Eco37C16DptFP | |
| 21235 | DUF4102 domain-containing protein | |||
| plasmid pRHB37-C16_2 | ||||
| 25040 | 73 aa hypothetical protein | |||
| 25045 | M | M.EcoSTEC383ORFGP (100% identity) | M.Eco37C16ORF25045P | |
| 25050 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14150 | isocitrate dehydrogenase | |||
| 14155 | R | EcosEC27McrCP (100% identity) | Eco37C16McrCP | |
| 14160 | R | EmaE2C08McrBP (100% identity) | Eco37C16McrBP | |
| 14165 | tail fiber assembly protein | |||
| 21210 | 206 aa hypothetical protein | |||
| 21215 | R | EcoSE11MrrP (100% identity) | Eco37C16MrrP | |