Escherichia coli RHB38-C15 |
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Putative Escherichia coli RHB38-C15 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,075,521 bp | CP057087 |
| plasmid pRHB38-C15_2: | 140,512 bp | CP057088 |
| plasmid pRHB38-C15_3: | 45,753 bp | CP057089 |
REBASE acronym: Eco38C15
Org_num: 43160
All begin HVZ72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12045 | restriction endonuclease | |||
| 12050 | M | M.Eco32C15ORF11590P (100% identity) | M.Eco38C15ORF12050P | |
| 12055 | S | S.Eco353ORF13560P (65% identity) | S.Eco38C15ORF12050P | |
| 12060 | R | Ecou021ORF19870P (99% identity) | Eco38C15ORF12050P | |
| 12065 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 800 | phosphohydrolase | |||
| 805 | M | M.Eco4978DcmP (100% identity) | CCWGG | M.Eco38C15DcmP |
| 810 | V | V.EcoZYB62DcmP (100% identity) | V.Eco38C15DcmP | |
| 815 | drug/metabolite exporter YedA | |||
| 11780 | tellurite resistance TerB family protein | |||
| 11795 | M | M.EcoEC416ORF46640P (100% identity) | M.Eco38C15ORF11795P | |
| 11800 | 67 aa hypothetical protein | |||
| 12250 | HNH endonuclease | |||
| 12255 | R | SflFF17ORF19275P (99% identity) | Eco38C15ORF12255P | |
| 12260 | 59 aa hypothetical protein | |||
| 17145 | cell division protein DamX | |||
| 17150 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco38C15DamP |
| 17155 | ribulose-phosphate 3-epimerase | |||
| 17675 | DUF2556 family protein | |||
| 17680 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco38C15ORF17680P |
| 17685 | DNA-binding transcriptional regulator Fis | |||
| 22380 | recombination protein NinB | |||
| 22385 | M | M.Efe65411ORF13820P (100% identity) | GATC | M.Eco38C15ORF22385P |
| 22390 | NinE family protein | |||
| plasmid pRHB38-C15_2 | ||||
| 24440 | IS110 family transposase | |||
| 24445 | M | M.EcoE1728ORF3005P (100% identity) | M.Eco38C15ORF24445P | |
| 24450 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB38-C15_3 | ||||
| 24995 | mobilization protein MobX | |||
| 25000 | R | SspS13ORF650P (100% identity) | Eco38C15ORF25005P | |
| 25005 | M | M.SspS13ORF650P (100% identity) | M.Eco38C15ORF25005P | |
| 25010 | 67 aa hypothetical protein | |||