Escherichia coli RHB38-C21 |
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Putative Escherichia coli RHB38-C21 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,881,210 bp | CP057085 |
| plasmid pRHB38-C21_2: | 87,754 bp | CP057086 |
REBASE acronym: Eco38C21
Org_num: 43161
All begin HVZ75_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco38C21DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2200 | DUF2556 family protein | |||
| 2205 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco38C21ORF2205P |
| 2210 | DNA-binding transcriptional regulator Fis | |||
| 5670 | TraR/DksA family transcriptional regulator | |||
| 5675 | M | M.EcoF1005ORF10740P (100% identity) | GATC | M.Eco38C21ORF5675P |
| 5680 | replication endonuclease | |||
| 7525 | recombination protein NinB | |||
| 7530 | M | M.SflWW1ORF7070P (99% identity) | GATC | M.Eco38C21ORF7530P |
| 7535 | NinE family protein | |||
| 9620 | phosphohydrolase | |||
| 9625 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco38C21DcmP |
| 9630 | V | V.SsoSE61DcmP (100% identity) | V.Eco38C21DcmP | |
| 9635 | drug/metabolite exporter YedA | |||
| 13650 | LexA family transcriptional regulator | |||
| 13655 | M | M.EcoH227ORFAP (100% identity) | GATC | M.Eco38C21ORF13655P |
| 13660 | PerC family transcriptional regulator | |||
| 16880 | DUF1317 family protein | |||
| 16885 | M | M.EfeC13ORF14690P (100% identity) | M.Eco38C21ORF16885P | |
| 16890 | cell division protein ZapA | |||
| 20300 | sialate O-acetylesterase | |||
| 20305 | R | SflFF16ORF19630P (100% identity) | Eco38C21ORF20305P | |
| 20310 | IS3 family transposase | |||
| 20325 | restriction endonuclease | |||
| 20330 | M | M.SflWW1ORF19920P (100% identity) | M.Eco38C21ORF20330P | |
| 20335 | integrase arm-type DNA-binding domain-containing | |||
| 21690 | phage holin, lambda family | |||
| 21695 | M | M.SflLIN17ORF17405P (100% identity) | M.Eco38C21ORF21695P | |
| 21700 | TrmB family transcriptional regulator | |||
| 21725 | LexA family transcriptional regulator | |||
| 21730 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco38C21ORF21730P |
| 21735 | PerC family transcriptional regulator | |||
| plasmid pRHB38-C21_2 | ||||
| 24035 | 73 aa hypothetical protein | |||
| 24040 | M | M.SflN92ORF24820P (100% identity) | M.Eco38C21ORF24040P | |
| 24045 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13445 | isocitrate dehydrogenase | |||
| 13450 | R | EcoH227GmrSDP (100% identity) | Eco38C21GmrSDP | |
| 13455 | recombinase family protein | |||