Escherichia coli RHB42-C02 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB42-C02 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,043,872 bp | CP056947 |
| plasmid pRHB42-C02_2: | 65,869 bp | CP056948 |
REBASE acronym: Eco42C02
Org_num: 43189
All begin HV016_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20570 | DUF262 domain-containing protein | |||
| 20575 | R | Eco6C06ORF21835P (100% identity) | CACNNNNNNNGTTG | Eco42C02ORF20580P |
| 20580 | M | M.SspS13ORF3945P (100% identity) | CACNNNNNNNGTTG | M.Eco42C02ORF20580P |
| 20585 | S | S.Ecoi362ORF3832P (100% identity) | CACNNNNNNNGTTG | S.Eco42C02ORF20580P |
| 20590 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.Fnu048ORFTP (100% identity) | GATC | M.Eco42C02DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2340 | DUF2556 family protein | |||
| 2345 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco42C02ORF2345P |
| 2350 | DNA-binding transcriptional regulator Fis | |||
| 6675 | DUF1382 family protein | |||
| 6680 | M | M.EcoWP4ORF12630P (97% identity) | M.Eco42C02ORF6680P | |
| 6685 | PerC family transcriptional regulator | |||
| 9775 | phosphohydrolase | |||
| 9780 | M | M.Ecos135DcmP (99% identity) | CCWGG | M.Eco42C02DcmP |
| 9785 | V | V.SflFF64DcmP (100% identity) | V.Eco42C02DcmP | |
| 9790 | drug/metabolite exporter YedA | |||
| 20795 | HNH endonuclease | |||
| 20800 | R | Ecoi362ORF3874P (100% identity) | Eco42C02ORF20800P | |
| 20805 | 59 aa hypothetical protein | |||
| plasmid pRHB42-C02_2 | ||||
| 23850 | 102 aa hypothetical protein | |||
| 23855 | M | M.SenST46ORF25580P (100% identity) | M.Eco42C02ORF23855P | |
| 23860 | 69 aa hypothetical protein | |||