Escherichia coli RHBSTW-00081 |
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Putative Escherichia coli RHBSTW-00081 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,242,468 bp | CP056873 |
| plasmid pRHBSTW-00081_2: | 92,934 bp | CP056874 |
| plasmid pRHBSTW-00081_3: | 75,466 bp | CP056875 |
REBASE acronym: EcoW081
Org_num: 43199
All begin HV057_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13495 | type II toxin-antitoxin system RelB/DinJ family | |||
| 13500 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoW081ORF13500P |
| 13505 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoW081ORF13500P |
| 13510 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoW081ORF13500P |
| 13515 | 184 aa hypothetical protein | |||
| 18025 | endoribonuclease SymE | |||
| 18030 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoW081ORF18040P |
| 18035 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoW081ORF18040P |
| 18040 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoW081ORF18040P |
| 18045 | restriction endonuclease | |||
| 19845 | ash family protein | |||
| 19850 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoW081ORF19855P |
| 19855 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoW081ORF19855P |
| 19860 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoW081ORF19855P |
| 19865 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2870 | DUF262 domain-containing protein | |||
| 2875 | R | R2.EcosS3ORF2905P (100% identity) | EcoW081ORF2880P | |
| 2880 | M | M2.EcosS3ORF2905P (100% identity) | M.EcoW081ORF2880P | |
| 2885 | antitermination protein | |||
| 3740 | drug/metabolite exporter YedA | |||
| 3745 | V | V.SflC32DcmP (74% identity) | V.EcoW081DcmP | |
| 3750 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoW081DcmP |
| 3755 | phosphohydrolase | |||
| 7180 | PerC family transcriptional regulator | |||
| 7185 | M | M.EcoW082ORF7200P (100% identity) | M.EcoW081ORF7185P | |
| 7190 | DUF1382 family protein | |||
| 11410 | DNA-binding transcriptional regulator Fis | |||
| 11415 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoW081ORF11415P |
| 11420 | DUF2556 family protein | |||
| 12010 | ribulose-phosphate 3-epimerase | |||
| 12015 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW081DamP |
| 12020 | cell division protein DamX | |||
| 16670 | conjugal transfer protein TraG N-terminal | |||
| 16675 | M | M.EcosS3ORF15775P (100% identity) | M.EcoW081ORF16675P | |
| 16680 | R | EcosS3ORF15775P (100% identity) | EcoW081ORF16675P | |
| 16685 | 555 aa hypothetical protein | |||
| 23320 | 71 aa hypothetical protein | |||
| 23325 | M | M.KpnYN1ORFGP (89% identity) | M.EcoW081ORF23325P | |
| 23330 | helix-turn-helix transcriptional regulator | |||
| 25570 | TrmB family transcriptional regulator | |||
| 25575 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoW081ORF25575P |
| 25590 | DUF3927 family protein | |||
| plasmid pRHBSTW-00081_2 | ||||
| 26085 | 73 aa hypothetical protein | |||
| 26090 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoW081ORF26090P | |
| 26095 | 102 aa hypothetical protein | |||
| plasmid pRHBSTW-00081_3 | ||||
| 26300 | 103 aa hypothetical protein | |||
| 26305 | M | M.EcoW082ORF26335P (100% identity) | M.EcoW081ORF26305P | |
| 26310 | 73 aa hypothetical protein | |||