Escherichia coli RHBSTW-00176 |
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Putative Escherichia coli RHBSTW-00176 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,237,504 bp | CP056800 |
| plasmid pRHBSTW-00176_2: | 114,414 bp | CP056801 |
| plasmid pRHBSTW-00176_3: | 79,649 bp | CP056802 |
REBASE acronym: Eco0176
Org_num: 43017
All begin HV108_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21610 | DUF262 domain-containing protein | |||
| 21615 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | Eco0176ORF21620P |
| 21620 | M | M.SspS13ORF3945P (100% identity) | CAAYNNNNNNNNTGAG | M.Eco0176ORF21620P |
| 21625 | S | S.EcoSP5ORF2185P (100% identity) | CAAYNNNNNNNNTGAG | S.Eco0176ORF21620P |
| 21630 | endoribonuclease SymE | |||
| 21820 | 128 aa hypothetical protein | |||
| 21825 | M | M.EcoSP5ORF1945P (100% identity) | M.Eco0176ORF21825P | |
| 21830 | S | S.EcoSP5ORF1945P (100% identity) | S.Eco0176ORF21825P | |
| 21835 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2135 | cell division protein DamX | |||
| 2140 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0176DamP |
| 2145 | ribulose-phosphate 3-epimerase | |||
| 2665 | DUF2556 family protein | |||
| 2670 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco0176ORF2670P |
| 2675 | DNA-binding transcriptional regulator Fis | |||
| 6245 | 257 aa hypothetical protein | |||
| 6250 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco0176ORF6250P | |
| 6255 | R | Sso8033ORF3755P (100% identity) | Eco0176ORF6250P | |
| 6260 | toprim domain-containing protein | |||
| 11185 | TrmB family transcriptional regulator | |||
| 11190 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco0176ORF11190P |
| 11210 | DUF1737 domain-containing protein | |||
| 14585 | RusA family crossover junction | |||
| 14590 | M | M.EcoSCU482ORF21135P (100% identity) | GATC | M.Eco0176ORF14590P |
| 14595 | PerC family transcriptional regulator | |||
| 15140 | drug/metabolite exporter YedA | |||
| 15145 | V | V.SflC32DcmP (74% identity) | V.Eco0176DcmP | |
| 15150 | M | M.EcoSP5DcmP (100% identity) | CCWGG | M.Eco0176DcmP |
| 15155 | phosphohydrolase | |||
| 21800 | HNH endonuclease | |||
| 21805 | R | EcosB2CORFAP (100% identity) | Eco0176ORF21805P | |
| 21810 | AAA family ATPase | |||
| plasmid pRHBSTW-00176_3 | ||||
| 26165 | 102 aa hypothetical protein | |||
| 26170 | M | M.SflN101ORF24625P (99% identity) | M.Eco0176ORF26170P | |
| 26175 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21805 | HNH endonuclease | |||
| 21810 | R | EcoSP46McrBP (100% identity) | Eco0176McrBP | |
| 21815 | R | EcoSP5McrCP (100% identity) | Eco0176McrCP | |
| 21820 | 128 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHBSTW-00176_2 | ||||
| 26025 | 76 aa hypothetical protein | |||
| 26030 | M | M.Ecoppa6ORF24465P (100% identity) | M.Eco0176ORF26030P | |
| 26035 | 269 aa hypothetical protein | |||