Ref: Klotz,M.G. et al. Appl. Environ. Microbiol. 72 (9), 6299-6315 (2006)

REBASE ref # 9645

Sequence length:GenBank #:
Chromosome: 3,481,691 bp CP000127 (NC_007484)
plasmid A: 40,420 bp CP000126 (NC_007483)

REBASE acronym: NocA

Org_num: 4178

 

All begin Noc_, Noc_A

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
159 sodium/proton antiporter, CPA1 family
160 R type I site-specific restriction-modification NocAORF160P
161 Succinylglutamate desuccinylase/aspartoacylase
 
438 Plasmid maintenance system killer
439 M M.HspDN3ORF15120P (83% identity) M.NocAORF439BP
440 PilT protein-like protein
441 plasmid protein
442 Transposase
443 M 46 aa hypothetical protein M.NocAORF439AP
444 Plasmid stabilization system
445 Helix-turn-helix protein, CopG
446 S S.Cbe229ORF1730P (44% identity) S.NocAORF439P
??? R HspDN3ORF15120P (77% identity) NocAORF439P
449 98 aa conserved hypothetical protein
 
1157 132 aa conserved hypothetical protein
??? M type I restriction-modification system, M subunit M.NocAORF1158P
1160 S S.Sal18064ORF6435P (38% identity) S.NocAORF1158P
1161 235 aa conserved hypothetical protein
1162 156 aa conserved hypothetical protein
1163 R MprAceLIIIP (70% identity) NocAORF1158P
1164 141 aa conserved hypothetical protein
 
1200 pseudogene
1201 M M.NwaCORF1822P (96% identity) M.NocAORF1201P
1202 Protein of unknown function DUF86
1203 DNA polymerase, beta-like region
1204 S S.NwaCORF1822P (61% identity) S.NocAORF1201P
1205 R NwaCORF1822P (94% identity) NocAORF1201P
1206 methionine synthase (B12-dependent)
 
1803 transposase
1804 R AspDG881ORFBP (82% identity) NocAORF1809P
1805 Death-on-curing protein
1806 Abortive infection bacteriophage resistance
1807 protein containing HTH-type DNA-binding domain
1808 S S.MspP4B1ORF1545P (50% identity) S.NocAORF1809P
1809 M M.MspP4B1ORF1545P (60% identity) M.NocAORF1809P
1810 5-nucleotidase
 
2686 Transposase
2687 M M.NwaCORF430P (97% identity) M.NocAORF2687P
2688 S S.Pku7850SORF17595P (51% identity) S.NocAORF2687P
2689 R NwaCORF430P (97% identity) NocAORF2687P
2690 Short-chain dehydrogenase/reductase SDR
 
2902 Transposase
2903 M M.MspC1S70ORF13435P (89% identity) M.NocAORF2903P
2904 S S.AspP2S70ORF16320P (51% identity) S.NocAORF2903P
2905 Nucleotidyltransferase substrate binding
2906 116 aa hypothetical protein
2907 231 aa conserved hypothetical protein
2908 129 aa conserved hypothetical protein
2909 R NwaCORF2990P (96% identity) NocAORF2903P
2910 Protein of unknown function DUF45
 
2923 FxsA cytoplasmic membrane protein
??? M type I restriction-modification system, M subunit M.NocAORF2924P
2925 130 aa conserved hypothetical protein
 
3027 79 aa conserved hypothetical protein
3028 R KspM2ORF9490P (83% identity) NocAORF3029P
3029 M M.DmuORFBP (90% identity) M.NocAORF3029P
3030 S S2.DhyAcRS1ORF6185P (63% identity) S.NocAORF3029P
3031 70 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
58 119 aa hypothetical protein
59 M M.DnoVCSORF180P (71% identity) M.NocAORF59P
60 ATP-binding region, ATPase-like protein
 
343 392 aa hypothetical protein
344 M M.NwaCORF2759P (93% identity) GATC M.NocADamP
345 Thioredoxin reductase
 
418 pseudogene
??? R Che9613ORF2190P (26% identity) GANTC NocAORF419P
419 M M.NwaCORF2682P (96% identity) GANTC M.NocAORF419P
420 Amidohydrolase-like protein
 
545 Helicase-like protein
546 M M.Pae23197ORF8265P (58% identity) M.NocAORF546P
547 204 aa hypothetical protein
 
654 949 aa conserved hypothetical protein
655 M M.MfiC10ORFUP (69% identity) M.NocAORF655P
656 helicase, DEAD/DEAH box family
 
1366 Transposase
1367 M M.Gsp652769ORF23295P (67% identity) AGGCCT M.NocAORF1367P
??? R Gsp652769ORF23295P (77% identity) AGGCCT NocAORF1367P
1370 LmbE-like protein
 
1464 Micrococcal nuclease (SNase-like)
1465 RM Mrh1211ORF11560P (69% identity) NocAORF1465P
1466 683 aa conserved hypothetical protein
 
1899 87 aa conserved hypothetical membrane protein
??? RM helicase A859L NocAORF1900P
1901 Inorganic diphosphatase
 
2195 296 aa hypothetical protein
2196 M M.PspOMI (61% identity) AGGCCT M.NocAORF2196P
2197 R SspLMB15ORF3945P (24% identity) NocAORF2196P
2198 Transposase, IS605 OrfB
 
plasmid A
 
27 WGR
28 RM NocNS58ORF310P (100% identity) NocAORF28P
29 Helicase-like
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
1459 Peptidase M28
1460 M possible DNA methylase M.NocAORF1460P
1461 PilT-like protein
 
2926 UbiE/COQ5 methyltransferase
2927 R Lsp19329ORF15700P (84% identity) NocAORF2928P
2928 M M.Lsp19329ORF15700AP (42% identity) M.NocAORF2928P
2929 127 aa conserved hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
plasmid A
 
9 135 aa hypothetical protein
10 R NwaCMrrP (100% identity) NocAMrrP
11 244 aa hypothetical protein