Escherichia coli RHBSTW-01004 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHBSTW-01004 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,201,279 bp
GenBank #: CP056190
REBASE acronym: Eco1004
Org_num: 43031
All begin HV348_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20765 | restriction endonuclease | |||
| 20770 | M | M.EcoW072ORF20660P (100% identity) | GGYANNNNNGTNG | M.Eco1004ORF20770P |
| 20775 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco1004ORF20770P |
| 20780 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco1004ORF20770P |
| 20785 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1690 | cell division protein DamX | |||
| 1695 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1004DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.Eco1004ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 9735 | phosphohydrolase | |||
| 9740 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1004DcmP |
| 9745 | V | V.EcosC25DcmP (100% identity) | V.Eco1004DcmP | |
| 9750 | drug/metabolite exporter YedA | |||
| 15105 | protein ninF | |||
| 15110 | M | M.EcoK5643ORF16330P (95% identity) | M.Eco1004ORF15110P | |
| 15115 | NinE family protein | |||
| 16930 | 71 aa hypothetical protein | |||
| 16935 | M | M.Sen21974ORF23385P (100% identity) | M.Eco1004ORF16935P | |
| 16940 | 145 aa hypothetical protein | |||
| 21325 | conjugal transfer protein TraG N-terminal | |||
| 21330 | M | M.EcosS3ORF15775P (100% identity) | M.Eco1004ORF21330P | |
| 21335 | R | EcosS3ORF15775P (100% identity) | Eco1004ORF21330P | |
| 21340 | 555 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13530 | NinE family protein | |||
| 13535 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1004ORF13535P |
| 13540 | recombination protein NinB | |||