Citrobacter freundii RHBSTW-00589 |
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Putative Citrobacter freundii RHBSTW-00589 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,895,815 bp
GenBank #: CP056395
REBASE acronym: Cfr589
Org_num: 42999
All begin HV241_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 300 | toxin | |||
| 310 | R | Kpn97ORF8585P (72% identity) | Cfr589ORF310P | |
| 315 | M48 family metallopeptidase | |||
| 3445 | endoribonuclease SymE | |||
| 3450 | R | Sen5056ORF19475P (98% identity) | Cfr589ORF3460P | |
| 3455 | S | S.KquL002ORFBP (60% identity) | S.Cfr589ORF3460P | |
| 3460 | M | M.CyoL6ORF20850P (97% identity) | M.Cfr589ORF3460P | |
| 3465 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1945 | cell division protein DamX | |||
| 1950 | M | M.Eco9094DamP (100% identity) | GATC | M.Cfr589DamP |
| 1955 | ribulose-phosphate 3-epimerase | |||
| 7710 | replication endonuclease | |||
| 7715 | R | Cfr880ORF5110P (94% identity) | Cfr589ORF7720P | |
| 7720 | M | M.Cfr880ORF5110P (95% identity) | M.Cfr589ORF7720P | |
| 7725 | phage portal protein | |||
| 9165 | phosphohydrolase | |||
| 9170 | M | M.Eco9094ORF3040P (100% identity) | M.Cfr589ORF9170P | |
| 9175 | V | V.Eco9094ORF3040P (100% identity) | V.Cfr589ORF9170P | |
| 9180 | drug/metabolite exporter YedA | |||
| 16880 | toprim domain-containing protein | |||
| 16885 | R | SenB82ORF5360P (98% identity) | Cfr589ORF16885P | |
| 16890 | IS3 family transposase | |||
| 18970 | 190 aa hypothetical protein | |||
| 18975 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Cfr589ORF18980P |
| 18980 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Cfr589ORF18980P |
| 18985 | acetyltransferase | |||
| 19755 | 70 aa hypothetical protein | |||
| 19760 | M | M.Cfr56415ORF21615P (100% identity) | M.Cfr589ORF19760P | |
| 19765 | DUF2732 family protein | |||
| 20795 | DNA-binding transcriptional regulator Fis | |||
| 20800 | M | M.CfrU1ORF2155P (100% identity) | M.Cfr589ORF20800P | |
| 20805 | DUF2556 family protein | |||
| 22080 | DUF4406 domain-containing protein | |||
| 22085 | M | M.Eco9094ORF4599P (91% identity) | M.Cfr589ORF22085P | |
| 22090 | 3-5 exoribonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3460 | type I restriction-modification system subunit | |||
| 3465 | R | CyoL6McrCP (98% identity) | Cfr589McrCP | |
| 3470 | R | CyoCF10McrBP (95% identity) | Cfr589McrBP | |
| 3475 | 130 aa hypothetical protein | |||