Escherichia coli RHBSTW-00839 |
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Putative Escherichia coli RHBSTW-00839 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,208,709 bp
GenBank #: CP056304
REBASE acronym: Eco839
Org_num: 42691
All begin HV293_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3225 | endoribonuclease SymE | |||
| 3230 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco839ORF3240P |
| 3235 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco839ORF3240P |
| 3240 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco839ORF3240P |
| 3245 | restriction endonuclease | |||
| 5035 | ash family protein | |||
| 5040 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco839ORF5045P |
| 5045 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco839ORF5045P |
| 5050 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco839ORF5045P |
| 5055 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2885 | helix-turn-helix domain-containing protein | |||
| 2890 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco839ORF2890P |
| 2895 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco839ORF2890P |
| 2900 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco839ORF2890P |
| 2905 | McrC family protein | |||
| 8500 | 133 aa hypothetical protein | |||
| 8505 | M | M.KpnYN1ORFGP (89% identity) | M.Eco839ORF8505P | |
| 8510 | helix-turn-helix transcriptional regulator | |||
| 10730 | TrmB family transcriptional regulator | |||
| 10735 | M | M.Eco0440ORFDP (100% identity) | A | M.Eco839ORF10735P |
| 10750 | DUF3927 family protein | |||
| 13760 | class II holin family protein | |||
| 13780 | M | M.SflJ17BORF23540P (100% identity) | A | M.Eco839ORF13780P |
| 13785 | TrmB family transcriptional regulator | |||
| 14630 | drug/metabolite exporter YedA | |||
| 14635 | V | V.SflC32DcmP (74% identity) | V.Eco839DcmP | |
| 14640 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco839DcmP |
| 14645 | phosphohydrolase | |||
| 21950 | DNA-binding transcriptional regulator Fis | |||
| 21955 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco839ORF21955P |
| 21960 | DUF2556 family protein | |||
| 22550 | ribulose-phosphate 3-epimerase | |||
| 22555 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco839DamP |
| 22560 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2900 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 2905 | R | EcosS9McrCP (100% identity) | Eco839McrCP | |
| 2910 | R | EcosS3McrBP (100% identity) | Eco839McrBP | |
| 2915 | glycosyltransferase family 2 protein | |||