Escherichia coli RHBSTW-00863 |
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Putative Escherichia coli RHBSTW-00863 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,829,688 bp | CP056278 |
| plasmid pRHBSTW-00863_3: | 52,530 bp | CP056280 |
REBASE acronym: Eco863
Org_num: 42694
All begin HV305_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5685 | IS1 family transposase | |||
| 5690 | R | Ror24150ORF17255P (100% identity) | Eco863ORF5700P | |
| 5695 | S | S.EcoSCU118ORF5500P (100% identity) | S.Eco863ORF5700P | |
| 5700 | M | M.EcoSCU118ORF5500P (100% identity) | M.Eco863ORF5700P | |
| 5705 | ParB N-terminal domain-containing protein | |||
| 20180 | adenine/cytosine-specific restriction | |||
| 20185 | R | Ecos671ORFCP (100% identity) | Eco863ORF20190P | |
| 20190 | M | M.SflFF12ORF17265P (100% identity) | M.Eco863ORF20190P | |
| 20195 | S | S.SflFF12ORF17265P (100% identity) | S.Eco863ORF20190P | |
| 20200 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1850 | cell division protein DamX | |||
| 1855 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco863DamP |
| 1860 | ribulose-phosphate 3-epimerase | |||
| 2480 | DUF2556 family protein | |||
| 2485 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco863ORF2485P |
| 2490 | DNA-binding transcriptional regulator Fis | |||
| 5770 | TraR/DksA family transcriptional regulator | |||
| 5775 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco863ORF5775P |
| 5780 | replication endonuclease | |||
| 9310 | phosphohydrolase | |||
| 9315 | M | M.SflN116DcmP (100% identity) | CCWGG | M.Eco863DcmP |
| 9320 | V | V.SflN116DcmP (100% identity) | V.Eco863DcmP | |
| 9325 | drug/metabolite exporter YedA | |||
| 13970 | Ail/Lom family outer membrane beta-barrel | |||
| 13990 | M | M.Eco69ORF21650P (99% identity) | A | M.Eco863ORF13990P |
| 13995 | TrmB family transcriptional regulator | |||
| 14050 | 84 aa hypothetical protein | |||
| 14055 | M | M.EcoDEC15EORF1145P (100% identity) | M.Eco863ORF14055P | |
| 14060 | DUF977 family protein | |||
| 18500 | DUF4102 domain-containing protein | |||
| 18505 | R | Sso8033ORF3755P (100% identity) | Eco863ORF18510P | |
| 18510 | M | M.EcoSTB201ORF17690P (100% identity) | M.Eco863ORF18510P | |
| 18515 | 257 aa hypothetical protein | |||
| 20625 | sigma 54-interacting transcriptional regulator | |||
| ??? | R | EcoPEC0011ORF2095P (100% identity) | Eco863ORF20630P | |
| 20635 | IS3-like element IS911 family transposase | |||
| plasmid pRHBSTW-00863_3 | ||||
| 24190 | HNH endonuclease | |||
| 24195 | M | M.Xca80ORFEP (33% identity) | M.Eco863ORF24195P | |
| 24200 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20175 | GTPase | |||
| 20180 | R | Ssp28760MrrP (100% identity) | Eco863MrrP | |
| 20185 | type I restriction-modification system | |||