Escherichia coli RHBSTW-00895 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHBSTW-00895 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,985,169 bp | CP056263 |
| plasmid pRHBSTW-00895_2: | 77,336 bp | CP056264 |
REBASE acronym: Eco895
Org_num: 42579
All begin HV315_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19450 | endoribonuclease SymE | |||
| 19455 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | Eco895ORF19465P |
| 19460 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.Eco895ORF19465P |
| 19465 | M | M.Esp9308ORFIP (100% identity) | CGTANNNNNGTC | M.Eco895ORF19465P |
| 19470 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1390 | TrmB family transcriptional regulator | |||
| 1395 | M | M.SsoL4094ORF17815P (35% identity) | M.Eco895ORF1395AP | |
| 1400 | IS4-like element IS421 family transposase | |||
| 1405 | M | M.EcoDLI5aORF23305BP (93% identity) | M.Eco895ORF1395BP | |
| 1425 | DUF1737 domain-containing protein | |||
| 2235 | RusA family crossover junction | |||
| 2240 | M | M.Eco0503ORF23755P (42% identity) | M.Eco895ORF2240P | |
| 2260 | anti-adapter protein IraM | |||
| 6090 | replication endonuclease | |||
| 6095 | M | M.EcoWH333ORF4405P (100% identity) | TGGCCA | M.Eco895ORF6095P |
| 6100 | AAA family ATPase | |||
| 6405 | drug/metabolite exporter YedA | |||
| 6410 | V | V.EcosEC7DcmP (100% identity) | V.Eco895DcmP | |
| 6415 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco895DcmP |
| 6420 | phosphohydrolase | |||
| 11435 | integrase arm-type DNA-binding domain-containing | |||
| 11440 | M | M.EcoR37ORF3180P (100% identity) | M.Eco895ORF11440P | |
| 11445 | R | EcoDLI5aORF8980P (100% identity) | Eco895ORF11440P | |
| 11450 | DUF3696 domain-containing protein | |||
| 13390 | DNA-binding transcriptional regulator Fis | |||
| 13395 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco895ORF13395P |
| 13400 | DUF2556 family protein | |||
| 14020 | ribulose-phosphate 3-epimerase | |||
| 14025 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco895DamP |
| 14030 | cell division protein DamX | |||
| plasmid pRHBSTW-00895_2 | ||||
| 24425 | 97 aa hypothetical protein | |||
| 24430 | M | M.EcoR29ORF15010P (99% identity) | M.Eco895ORF24430P | |
| 24435 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11635 | S8 family peptidase | |||
| 11640 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco895ORF11640P |
| 11645 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco895ORF11640P |
| 11650 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18370 | IS3 family transposase | |||
| 18375 | R | Eco9427McrCP (100% identity) | Eco895McrCP | |
| 18380 | R | Kpn0718McrBP (100% identity) | Eco895McrBP | |
| 18385 | 141 aa hypothetical protein | |||