Citrobacter freundii RHBSTW-00935 |
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Putative Citrobacter freundii RHBSTW-00935 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,103,922 bp | CP056238 |
| plasmid pRHBSTW-00935_2: | 206,642 bp | CP056239 |
REBASE acronym: Cfr935
Org_num: 42566
All begin HV330_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5355 | 197 aa hypothetical protein | |||
| 5360 | R | Kpn89IIP (100% identity) | GGANNNNNCTC | Cfr935ORF5370P |
| 5365 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Cfr935ORF5370P |
| 5370 | M | M.Kpn89II (100% identity) | GGANNNNNCTC | M.Cfr935ORF5370P |
| 5375 | transposase | |||
| 21165 | toll/interleukin-1 receptor domain-containing | |||
| 21170 | R | Cfr902ORF21195P (100% identity) | Cfr935ORF21175P | |
| 21175 | M | M.Cfr902ORF21195P (100% identity) | M.Cfr935ORF21175P | |
| 21180 | S | S.Cfr902ORF21195P (100% identity) | S.Cfr935ORF21175P | |
| 21185 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr935DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr935ORF2275P |
| 2280 | integrase family protein | |||
| 6160 | 146 aa hypothetical protein | |||
| 6165 | R | RorNC189ORF9120P (100% identity) | Cfr935ORF6170P | |
| 6170 | M | M.RorNC189ORF9120P (100% identity) | M.Cfr935ORF6170P | |
| 6175 | ThiF family adenylyltransferase | |||
| 6610 | recombination protein NinG | |||
| 6615 | M | M.Cfr902ORF6615P (100% identity) | M.Cfr935ORF6615P | |
| 6620 | antitermination protein | |||
| 9035 | 127 aa hypothetical protein | |||
| 9040 | M | M.Cfr902ORF9040P (100% identity) | M.Cfr935ORF9040P | |
| 9045 | replication endonuclease | |||
| 9810 | phosphohydrolase | |||
| 9815 | M | M.CspSL156ORF9755P (100% identity) | CCWGG | M.Cfr935ORF9815P |
| 9820 | V | V.Eco5172ORF1715P (100% identity) | V.Cfr935ORF9815P | |
| 9825 | drug/metabolite exporter YedA | |||
| 21075 | HNH endonuclease | |||
| 21080 | R | Cfr942ORF21885P (100% identity) | Cfr935ORF21080P | |
| 21085 | helix-turn-helix transcriptional regulator | |||
| 22095 | 190 aa hypothetical protein | |||
| 22100 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Cfr935ORF22105P |
| 22105 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Cfr935ORF22105P |
| 22110 | 79 aa hypothetical protein | |||
| 22965 | phage holin family protein | |||
| 22970 | M | M.Csp859ORF23300P (100% identity) | M.Cfr935ORF22970P | |
| 22975 | 71 aa hypothetical protein | |||
| 22995 | RusA family crossover junction | |||
| 23000 | M | M1.Csp1013ORF22925P (100% identity) | M1.Cfr935ORF23000P | |
| 23005 | M | M2.Cfr902ORF23020P (100% identity) | M2.Cfr935ORF23000P | |
| 23010 | conserved phage C-terminal domain-containing | |||
| plasmid pRHBSTW-00935_2 | ||||
| 25630 | AAA family ATPase | |||
| 25635 | M | M.Kpn3892ORF26955P (100% identity) | CCWGG | M.Cfr935ORF25635P |
| 25640 | R | Csp570ORF24815P (100% identity) | CCWGG | Cfr935ORF25635P |
| 25645 | tyrosine-type recombinase/integrase | |||
| 25665 | SOS response-associated peptidase family | |||
| 25670 | M | M.Kpni11ayORF5166P (100% identity) | M.Cfr935ORF25670P | |
| 25675 | 73 aa hypothetical protein | |||