Citrobacter freundii RHBSTW-00965 |
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Putative Citrobacter freundii RHBSTW-00965 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,167,828 bp | CP056232 |
| plasmid pRHBSTW-00965_2: | 339,929 bp | CP056233 |
REBASE acronym: Cfr965
Org_num: 42568
All begin HV336_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9390 | 388 aa hypothetical protein | |||
| 9395 | M | M.CfrB38III (100% identity) | CTCANNNNNNRTAY | M.Cfr965ORF9395P |
| 9400 | S | S.CfrB38III (100% identity) | CTCANNNNNNRTAY | S.Cfr965ORF9395P |
| 9405 | YecA family protein | |||
| 9410 | cold shock domain-containing protein | |||
| 9415 | R | EcoW102ORF9650P (99% identity) | CTCANNNNNNRTAY | Cfr965ORF9395P |
| 9420 | M48 family metallopeptidase | |||
| 21090 | AAA family ATPase | |||
| 21095 | M | M.Cfr23CZORF21090P (96% identity) | M.Cfr965ORF21095P | |
| 21100 | S | S.PkiP48ORF13765P (53% identity) | S.Cfr965ORF21095P | |
| 21105 | R | CspH1232ORFDP (98% identity) | Cfr965ORF21095P | |
| 21110 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1640 | cell division protein DamX | |||
| 1645 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr965DamP |
| 1650 | ribulose-phosphate 3-epimerase | |||
| 2170 | DUF2556 family protein | |||
| 2175 | M | M.Cfr4P1ORF4240P (98% identity) | ATGCAT | M.Cfr965ORF2175P |
| 2180 | site-specific integrase | |||
| 9075 | phosphohydrolase | |||
| 9080 | M | M.CfrC22ORF9660P (99% identity) | CCWGG | M.Cfr965ORF9080P |
| 9085 | V | V.CyoL6ORF9385P (99% identity) | V.Cfr965ORF9080P | |
| 9090 | drug/metabolite exporter YedA | |||
| 10945 | 85 aa hypothetical protein | |||
| 10950 | M | M.CfrMH16ORF10105P (99% identity) | M.Cfr965ORF10950P | |
| 10955 | 60 aa hypothetical protein | |||
| 12395 | 893 aa hypothetical protein | |||
| 12400 | M | M.Emo10ORF23155P (96% identity) | M.Cfr965ORF12400P | |
| 12405 | R | XboCS03ORF1250P (27% identity) | Cfr965ORF12400P | |
| 12410 | ISNCY-like element ISLad2 family transposase | |||
| plasmid pRHBSTW-00965_2 | ||||
| 25295 | recombinase family protein | |||
| 25300 | R | Sen23701ORF24490P (100% identity) | CCWGG | Cfr965ORF25305P |
| 25305 | M | M.EcoSK3ORF22595P (100% identity) | CCWGG | M.Cfr965ORF25305P |
| 25310 | IS1 family transposase | |||
| 25500 | DNA polymerase III subunit beta | |||
| 25505 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr965ORF25505P | |
| 25510 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15590 | integrase arm-type DNA-binding domain-containing | |||
| 15595 | M | M.Cfr236172ORF15025P (98% identity) | GCGCAG | M.Cfr965ORF15595P |
| 15600 | R | Cfr023IVP (99% identity) | GCGCAG | Cfr965ORF15595P |
| 15605 | shufflon system plasmid conjugative transfer | |||