Ref: Shaw,L.P. unpublished

REBASE ref # 28537

Sequence length:GenBank #:
Chromosome: 5,992,775 bp CP058180
plasmid pRHBSTW-00039_2: 133,995 bp CP058181
plasmid pRHBSTW-00039_3: 103,340 bp CP058182
plasmid pRHBSTW-00039_4: 95,921 bp CP058183
plasmid pRHBSTW-00039_5: 67,313 bp CP058184

REBASE acronym: Kgr39

Org_num: 42203

 

All begin HV042_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
5775 IS256 family transposase
5780 M M.SenPP122ORF4660P (100% identity) M.Kgr39ORF5780P
5785 S S.SenPP122ORF4660P (100% identity) S.Kgr39ORF5780P
5790 DUF91 domain-containing protein
5795 R SenPP122ORF4660P (100% identity) Kgr39ORF5780P
5800 56 aa hypothetical protein
 
24825 restriction endonuclease
24830 M M.KspM5a1ORF3680P (100% identity) GGCANNNNNNTTC M.Kgr39ORF24830P
24835 S S.KspM5a1ORF3680P (100% identity) GGCANNNNNNTTC S.Kgr39ORF24830P
24840 R KspM5a1ORF3680P (100% identity) GGCANNNNNNTTC Kgr39ORF24830P
24845 ATP-binding protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1935 cell division protein DamX
1940 M M.KspMPUS7DamP (100% identity) GATC M.Kgr39DamP
1945 ribulose-phosphate 3-epimerase
 
6565 89 aa hypothetical protein
6570 M M.Kpn9936ORFBP (88% identity) M.Kgr39ORF6570P
6575 DNA cytosine methyltransferase
 
6570 DNA adenine methylase
6575 M M.Kmi167ORF11005P (85% identity) M.Kgr39ORF6575P
6580 replication endonuclease
 
7935 80 aa hypothetical protein
7940 M M.Kgr54ORF8040P (100% identity) M.Kgr39ORF7940P
7945 DUF1133 family protein
 
10175 phosphohydrolase
10180 M M.KspMPUS7DcmP (100% identity) M.Kgr39DcmP
10185 V V.KspMPUS7DcmP (100% identity) V.Kgr39DcmP
10190 drug/metabolite exporter YedA
 
10365 56 aa hypothetical protein
10370 M M.KpnL491ORF13040P (100% identity) M.Kgr39ORF10370P
10375 76 aa hypothetical protein
 
16375 recombinase RecA
16380 M M.Kmi101ORF10325BP (100% identity) M.Kgr39ORF16380P
16385 85 aa hypothetical protein
 
18450 recombinase RecA
18455 M M.Cam165ORF17685P (87% identity) M.Kgr39ORF18455P
18460 85 aa hypothetical protein
 
21345 DUF1317 family protein
21350 M M.Kox452ORF20735P (100% identity) M.Kgr39ORF21350P
21355 73 aa hypothetical protein
 
27940 replication endonuclease
27945 M M1.Ksp1927ORF16240P (92% identity) M1.Kgr39ORF27945P
27950 51 aa hypothetical protein
27955 50 aa hypothetical protein
27960 M M1.Kmi409ORF11180P (94% identity) M2.Kgr39ORF27945P
27965 64 aa hypothetical protein
 
plasmid pRHBSTW-00039_2
 
29270 73 aa hypothetical protein
29275 M M.RspHC6ORFDP (100% identity) M.Kgr39ORF29275P
29280 92 aa hypothetical protein
 
plasmid pRHBSTW-00039_3
 
29485 IS6 family transposase
29490 R Sen23701ORF24490P (100% identity) CCWGG Kgr39ORF29495P
29495 M M.SenCEPR1ORF23900P (100% identity) CCWGG M.Kgr39ORF29495P
29500 Tn3 family transposase
 
29625 64 aa hypothetical protein
29630 M M.Sma2637ORF26600P (100% identity) M.Kgr39ORF29630P
29635 73 aa hypothetical protein
 
plasmid pRHBSTW-00039_4
 
30210 76 aa hypothetical protein
30215 M M.Rpl9528ORF5659P (100% identity) M.Kgr39ORF30215P
30220 73 aa hypothetical protein
 
plasmid pRHBSTW-00039_5
 
30620 111 aa hypothetical protein
30625 M M.Sma2637ORF26600P (100% identity) M.Kgr39ORF30625P
30630 73 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
plasmid pRHBSTW-00039_4
 
30045 IS5/IS1182 family transposase
30050 R Hpa177ORF22685P (99% identity) CCGCAG Kgr39ORF30055P
30055 M M.Yenp29930ORFAP (100% identity) CCGCAG M.Kgr39ORF30055P
30060 recombinase family protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
24820 PLP-dependent aminotransferase family protein
24825 R KspM5a1MrrP (100% identity) Kgr39MrrP
24830 type I restriction-modification system subunit