Citrobacter freundii RHBSTW-00862 |
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Putative Citrobacter freundii RHBSTW-00862 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,978,770 bp | CP055421 |
| plasmid pRHBSTW-00862_2: | 335,856 bp | CP055422 |
| plasmid unnamed: | 40,792 bp | CP055423 |
REBASE acronym: Cfr862
Org_num: 42118
All begin HV304_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13585 | ISL3 family transposase | |||
| 13590 | R | LadZ961ORF22445P (100% identity) | Cfr862ORF22175P | |
| 13595 | S | S.LadZ961ORF22445P (100% identity) | S.Cfr862ORF22175P | |
| 13600 | M | M.LadZ961ORF22445P (100% identity) | M.Cfr862ORF22175P | |
| 13605 | carbon-nitrogen hydrolase family protein | |||
| 14000 | M48 family metallopeptidase | |||
| 14005 | R | Cfr84ORF14300P (100% identity) | Cfr862ORF14025P | |
| 14010 | cold shock domain-containing protein | |||
| 14015 | YecA family protein | |||
| 14020 | S | S.Cfr84ORF14300P (100% identity) | S.Cfr862ORF14025P | |
| 14025 | M | M.EcoSHP24ORF10835P (100% identity) | M.Cfr862ORF14025P | |
| 14030 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr862DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2205 | DUF2556 family protein | |||
| 2210 | M | M.CfrSA79ORF7225P (100% identity) | ATGCAT | M.Cfr862ORF2210P |
| 2215 | DNA-binding transcriptional regulator Fis | |||
| 7365 | TraR/DksA C4-type zinc finger protein | |||
| 7370 | M | M.Cfr84ORF7355P (100% identity) | M.Cfr862ORF7370P | |
| 7375 | 94 aa hypothetical protein | |||
| 8430 | 224 aa hypothetical protein | |||
| 8435 | M | M.Csp944ORF10665P (100% identity) | M.Cfr862ORF8435P | |
| 8440 | 114 aa hypothetical protein | |||
| 8495 | conserved phage C-terminal domain-containing | |||
| 8500 | M | M.Cfr84ORF8490P (100% identity) | M.Cfr862ORF8500P | |
| 8505 | RusA family crossover junction | |||
| 10015 | phosphohydrolase | |||
| 10020 | M | M.Cfrz4ORF9245P (100% identity) | CCWGG | M.Cfr862ORF10020P |
| 10025 | V | V.CfrMH15ORF11700P (100% identity) | V.Cfr862ORF10020P | |
| 10030 | drug/metabolite exporter YedA | |||
| 20895 | HNH endonuclease | |||
| 20900 | R | Cfr84ORF21175P (100% identity) | Cfr862ORF20900P | |
| 20905 | IS3 family transposase | |||
| plasmid pRHBSTW-00862_2 | ||||
| 24695 | 76 aa hypothetical protein | |||
| 24700 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr862ORF24700P | |
| 24705 | DNA polymerase III subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3255 | 512 aa hypothetical protein | |||
| 3260 | R | Cpo163ORF8830P (100% identity) | Cfr862ORF3265P | |
| 3265 | M | M.Cfr84ORF3255P (100% identity) | M.Cfr862ORF3265P | |
| 3270 | GTPase family protein | |||
| plasmid unnamed | ||||
| 26030 | 125 aa hypothetical protein | |||
| 26035 | R | Cfr84ORF26315P (100% identity) | Cfr862ORF26040P | |
| 26040 | M | M.Cfr84ORF26315P (100% identity) | M.Cfr862ORF26040P | |
| 26045 | 94 aa hypothetical protein | |||