Citrobacter freundii RHBSTW-00488 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter freundii RHBSTW-00488 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,927,528 bp | CP055466 |
| plasmid pRHBSTW-00488_2: | 180,863 bp | CP055467 |
| plasmid pRHBSTW-00488_3: | 108,826 bp | CP055468 |
REBASE acronym: Cfr488
Org_num: 42117
All begin HV215_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21035 | DUF262 domain-containing protein | |||
| 21040 | M | M.EcoCPE35ORF5500P (100% identity) | M.Cfr488ORF21040P | |
| 21045 | S | S.Cfr444ORF21045P (100% identity) | S.Cfr488ORF21040P | |
| 21050 | R | Cfr444ORF21045P (100% identity) | Cfr488ORF21040P | |
| 21055 | 112 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1540 | cell division protein DamX | |||
| 1545 | M | M.Eco9094DamP (100% identity) | GATC | M.Cfr488DamP |
| 1550 | ribulose-phosphate 3-epimerase | |||
| 2090 | DUF2556 family protein | |||
| 2095 | M | M.CfrU1ORF2155P (100% identity) | M.Cfr488ORF2095P | |
| 2100 | DNA-binding transcriptional regulator Fis | |||
| 13960 | phage portal protein | |||
| 13965 | M | M.Cfr444ORF13965P (100% identity) | M.Cfr488ORF13965P | |
| 13970 | replication endonuclease | |||
| 13970 | replication endonuclease | |||
| 13975 | M | M.Cfr444ORF13975P (100% identity) | M.Cfr488ORF13975P | |
| 13980 | 75 aa hypothetical protein | |||
| 13985 | 67 aa hypothetical protein | |||
| 13990 | M | M.Cfr444ORF13990P (100% identity) | M.Cfr488ORF13990P | |
| 13995 | 3-5 exoribonuclease | |||
| 14250 | drug/metabolite exporter YedA | |||
| 14255 | V | V.Eco9094ORF3040P (100% identity) | V.Cfr488ORF14260P | |
| 14260 | M | M.Eco9094ORF3040P (100% identity) | M.Cfr488ORF14260P | |
| 14265 | phosphohydrolase | |||
| 20060 | IS3 family transposase | |||
| 20065 | RM | Cfr444ORF20065AP (100% identity) | Cfr488ORF20065AP | |
| 20070 | RM | Cfr444ORF20065BP (100% identity) | Cfr488ORF20065BP | |
| 20075 | IS3 family transposase | |||
| 20080 | RM | Cfr444ORF20065CP (100% identity) | Cfr488ORF20065CP | |
| 20085 | BREX-1 system phosphatase PglZ type A | |||
| plasmid pRHBSTW-00488_2 | ||||
| 23675 | DNA polymerase III subunit beta | |||
| 23680 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr488ORF23680P | |
| 23685 | 76 aa hypothetical protein | |||
| plasmid pRHBSTW-00488_3 | ||||
| 24890 | 76 aa hypothetical protein | |||
| 24895 | M | M.SphSSU5ORF88P (96% identity) | M.Cfr488ORF24895P | |
| 24900 | 280 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3525 | DUF262 domain-containing protein | |||
| 3530 | R | Emo1412ORF19075P (100% identity) | Cfr488ORF3535P | |
| 3535 | M | M.Emo1412ORF19075P (100% identity) | M.Cfr488ORF3535P | |
| 3540 | DUF2130 domain-containing protein | |||