Ref: Shaw,L.P. unpublished

REBASE ref # 28537

Sequence length:GenBank #:
Chromosome: 5,067,906 bp CP055538
plasmid pRHBSTW-00398_2: 299,953 bp CP055539
plasmid unnamed: 124,541 bp CP055540

REBASE acronym: Cfr398

Org_num: 42116

 

All begin HV183_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
2770 AAA family ATPase
2775 R Kox365ORF4605P (99% identity) Cfr398ORF2785P
2780 S S.Kox365ORF4605P (100% identity) S.Cfr398ORF2785P
2785 M M.Kox365ORF4605P (99% identity) M.Cfr398ORF2785P
2790 70 aa hypothetical protein
 
9320 391 aa hypothetical protein
9325 M M.Eco34C15ORF8650P (99% identity) M.Cfr398ORF9325P
9330 S S.EcoPO3ORF10055P (98% identity) S.Cfr398ORF9325P
9335 YecA family protein
9340 R Cfr116IP (99% identity) Cfr398ORF9325P
9345 M48 family metallopeptidase
 
17815 tyrosine-type recombinase/integrase
17820 M M.SenS688ORF13495P (12% identity) GGANNNNNCTC M.Cfr398ORF17820AP
17825 IS1 family transposase
17830 M M.KpnS1313ORF16435P (86% identity) GGANNNNNCTC M.Cfr398ORF17820BP
17835 S S.Kqu610ORF5290P (100% identity) GGANNNNNCTC S.Cfr398ORF17820P
17840 R Kpn1331ORFCP (100% identity) GGANNNNNCTC Cfr398ORF17820P
17845 IS1 family transposase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1105 28 aa hypothetical protein
1110 M M.Cfr355ORF1450P (99% identity) M.Cfr398ORF1110P
1115 R Cfr355ORF1450P (99% identity) Cfr398ORF1110P
1120 NAAT family transporter YhgN
 
1330 cell division protein DamX
1335 M M.Eco9094DamP (100% identity) GATC M.Cfr398DamP
1340 ribulose-phosphate 3-epimerase
 
2905 BREX-1 system phosphatase PglZ type A
2910 RM SmaUMH8I (97% identity) GCGAACB Cfr398ORF2910P
2915 BREX system P-loop protein BrxC
 
9025 phosphohydrolase
9030 M M.Cfr714ORF14660P (100% identity) M.Cfr398ORF9030P
9035 V V.Cfr714ORF14660P (100% identity) V.Cfr398ORF9030P
9040 drug/metabolite exporter YedA
 
9740 conserved phage C-terminal domain-containing
9745 M M1.CspC21ORF10975P (96% identity) M1.Cfr398ORF9745P
9750 M M1.Csp1013ORF22925P (97% identity) M2.Cfr398ORF9745P
9755 RusA family crossover junction
 
14505 255 aa hypothetical protein
14510 M M.CfrNIH4ORF11235P (100% identity) M.Cfr398ORF14510P
14515 ATP-binding protein
 
21855 DNA-binding transcriptional regulator Fis
21860 M M.CfrU1ORF2155P (100% identity) M.Cfr398ORF21860P
21865 DUF2556 family protein
 
plasmid pRHBSTW-00398_2
 
24600 recombinase family protein
24605 R Sen23701ORF24490P (100% identity) CCWGG Cfr398ORF24610P
24610 M M.SenCEPR1ORF23900P (100% identity) CCWGG M.Cfr398ORF24610P
24615 IS1 family transposase
 
24840 DNA polymerase III subunit beta
24845 M M.Sen3039ORF24445P (100% identity) M.Cfr398ORF24845P
24850 76 aa hypothetical protein
 
plasmid unnamed
 
26165 115 aa hypothetical protein
26170 M M.Csp424ORF23825P (100% identity) M.Cfr398ORF26170P
26175 73 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
2760 207 aa hypothetical protein
2765 R Kox365McrCP (99% identity) Cfr398McrCP
2770 R Rpl9179McrB2P (99% identity) Cfr398McrBP
2775 type I restriction endonuclease subunit R