Citrobacter freundii RHBSTW-00200 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter freundii RHBSTW-00200 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,266,015 bp | CP055551 |
| plasmid unnamed: | 266,524 bp | CP055552 |
REBASE acronym: Cfr200
Org_num: 42114
All begin HV119_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3360 | RNA-directed DNA polymerase | |||
| 3365 | M | M.Rel01CORF23440P (99% identity) | M.Cfr200ORF3365P | |
| 3370 | S | S.Rel01CORF23440P (100% identity) | S.Cfr200ORF3365P | |
| 3375 | R | Rel01CORF23440P (99% identity) | Cfr200ORF3365P | |
| 3380 | AAA family ATPase | |||
| 20745 | restriction endonuclease | |||
| 20750 | R | Cpo157ORF4132P (98% identity) | Cfr200ORF20755P | |
| 20755 | M | M.CspLY1ORF4220P (99% identity) | M.Cfr200ORF20755P | |
| 20760 | S | S.Ksp4251ORF22010P (88% identity) | S.Cfr200ORF20755P | |
| 20765 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.CfrBDDamP (99% identity) | GATC | M.Cfr200DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 2340 | DUF2556 family protein | |||
| 2345 | M | M.CfrBDORF12420P (99% identity) | ATGCAT | M.Cfr200ORF2345P |
| 2350 | DNA-binding transcriptional regulator Fis | |||
| 9200 | phosphohydrolase | |||
| 9205 | M | M.Cbr253II (99% identity) | CCWGG | M.Cfr200ORF9205P |
| 9210 | V | V.CfrBDDcmP (100% identity) | V.Cfr200ORF9205P | |
| 9215 | drug/metabolite exporter YedA | |||
| 20935 | HNH endonuclease | |||
| 20940 | R | Cfr370ORF21155P (97% identity) | Cfr200ORF20940P | |
| 20945 | toxin | |||
| plasmid unnamed | ||||
| 24415 | 55 aa hypothetical protein | |||
| 24420 | M | M.Ssp15303DcmP (100% identity) | M.Cfr200DcmP | |
| 24425 | thermonuclease family protein | |||
| 25060 | IS5-like element IS903B family transposase | |||
| 25065 | M | M.Ssp15303ORFDP (100% identity) | M.Cfr200ORF25065P | |
| 25070 | 202 aa hypothetical protein | |||
| 25190 | DNA-binding protein | |||
| 25195 | M | M.Ssp15303ORFEP (100% identity) | M.Cfr200ORF25195P | |
| 25200 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3375 | type I restriction endonuclease subunit R | |||
| 3380 | R | CbrE3C07McrBP (96% identity) | Cfr200McrB2P | |
| 3385 | R | Cpo1McrCP (92% identity) | Cfr200McrC2P | |
| 3390 | 215 aa hypothetical protein | |||
| 5935 | 299 aa hypothetical protein | |||
| 5940 | R | Eps158McrCP (99% identity) | Cfr200McrCP | |
| 5945 | R | Cfr120McrBP (99% identity) | Cfr200McrBP | |
| 5950 | SgrR family transcriptional regulator | |||
| 20740 | BrnT family toxin | |||
| 20745 | R | KspRE03MrrP (99% identity) | Cfr200MrrP | |
| 20750 | type I restriction-modification system | |||