Citrobacter freundii RHBSTW-00153 |
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Putative Citrobacter freundii RHBSTW-00153 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,163,581 bp | CP055564 |
| plasmid pRHBSTW-00153_2: | 309,293 bp | CP055565 |
REBASE acronym: Cfr153
Org_num: 42113
All begin HV101_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21470 | restriction endonuclease | |||
| 21475 | R | CfrE51ORF21070P (100% identity) | Cfr153ORF21480P | |
| 21480 | M | M.CfrE51ORF21070P (100% identity) | M.Cfr153ORF21480P | |
| 21485 | S | S.Cfr56415ORF5180P (100% identity) | S.Cfr153ORF21480P | |
| 21490 | endoribonuclease SymE | |||
| 21670 | 1376 aa hypothetical protein | |||
| 21675 | M | M.CfrE51ORF21275P (100% identity) | M.Cfr153ORF21675P | |
| 21680 | S | S.Cfr56415ORF4990P (100% identity) | S.Cfr153ORF21675P | |
| 21685 | DUF262 domain-containing protein | |||
| 21690 | DUF262 domain-containing protein | |||
| 21695 | R | CfrE51ORF21275P (99% identity) | Cfr153ORF21675P | |
| 21700 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1920 | cell division protein DamX | |||
| 1925 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr153DamP |
| 1930 | ribulose-phosphate 3-epimerase | |||
| 2470 | DUF2556 family protein | |||
| 2475 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr153ORF2475P |
| 2480 | DNA-binding transcriptional regulator Fis | |||
| 3520 | 3-5 exonuclease | |||
| 3525 | M | M.EcoXH992ORF11580P (98% identity) | M.Cfr153ORF3525P | |
| 3530 | replication endonuclease | |||
| 8090 | recombination protein NinG | |||
| 8095 | M | M.Cfr354ORF16440P (100% identity) | M.Cfr153ORF8095P | |
| 8100 | antitermination protein | |||
| 10330 | phosphohydrolase | |||
| 10335 | M | M.CfrLORF9975P (100% identity) | CCWGG | M.Cfr153ORF10335P |
| 10340 | V | V.CfrMH15ORF11700P (100% identity) | V.Cfr153ORF10335P | |
| 10345 | drug/metabolite exporter YedA | |||
| 10620 | 3-5 exoribonuclease | |||
| 10625 | M | M.Ero695ORF8615P (99% identity) | M.Cfr153ORF10625P | |
| 10630 | 68 aa hypothetical protein | |||
| 14080 | DUF968 domain-containing protein | |||
| 14085 | M | M.CfrE51ORF13210P (100% identity) | M.Cfr153ORF14085P | |
| 14090 | tyrosine-type recombinase/integrase | |||
| 16965 | 70 aa hypothetical protein | |||
| 16970 | M | M.CweMH18ORF4470P (100% identity) | M.Cfr153ORF16970P | |
| 16975 | DUF3850 domain-containing protein | |||
| 19755 | DUF1317 family protein | |||
| ??? | M | M.Cfr354ORF42800P (90% identity) | M.Cfr153ORF19760P | |
| 19765 | DUF4060 family protein | |||
| 21645 | HNH endonuclease | |||
| 21650 | R | CfrE51ORF21250P (100% identity) | Cfr153ORF21650P | |
| 21655 | restriction endonuclease | |||
| 22220 | 182 aa hypothetical protein | |||
| 22225 | M | M.Sen60561ORF11135P (99% identity) | M.Cfr153ORF22225P | |
| 22230 | 177 aa hypothetical protein | |||
| 23360 | phage holin family protein | |||
| 23365 | M | M.Cfr56415ORF3130P (100% identity) | M.Cfr153ORF23365P | |
| 23370 | 71 aa hypothetical protein | |||
| 23390 | RusA family crossover junction | |||
| 23395 | M | M.Cfr56415ORF3100P (100% identity) | M1.Cfr153ORF23395P | |
| 23400 | M | M.Cfr56415ORF3095P (100% identity) | M2.Cfr153ORF23395P | |
| 23405 | conserved phage C-terminal domain-containing | |||
| plasmid pRHBSTW-00153_2 | ||||
| 26290 | 76 aa hypothetical protein | |||
| 26295 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr153ORF26295P | |
| 26300 | DNA polymerase III subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHBSTW-00153_2 | ||||
| 26105 | DUF2130 domain-containing protein | |||
| 26110 | M | M.Yen3502ORF950P (100% identity) | M.Cfr153ORF26110P | |
| 26115 | R | Yen3502ORF950P (100% identity) | Cfr153ORF26110P | |
| 26120 | DUF262 domain-containing protein | |||