Citrobacter freundii RHBSTW-00110 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter freundii RHBSTW-00110 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,023,392 bp | CP055582 |
| plasmid pRHBSTW-00110_2: | 337,037 bp | CP055583 |
| plasmid unnamed: | 40,792 bp | CP055585 |
REBASE acronym: Cfr110
Org_num: 42112
All begin HV074_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13880 | ISL3 family transposase | |||
| 13885 | R | LadZ961ORF22445P (100% identity) | Cfr110ORF22465P | |
| 13890 | S | S.LadZ961ORF22445P (100% identity) | S.Cfr110ORF22465P | |
| 13895 | M | M.LadZ961ORF22445P (100% identity) | M.Cfr110ORF22465P | |
| 13900 | carbon-nitrogen hydrolase family protein | |||
| 14295 | M48 family metallopeptidase | |||
| 14300 | R | Cfr862ORF14025P (100% identity) | Cfr110ORF14320P | |
| 14305 | cold shock domain-containing protein | |||
| 14310 | YecA family protein | |||
| 14315 | S | S.Cfr862ORF14025P (100% identity) | S.Cfr110ORF14320P | |
| 14320 | M | M.EcoSHP24ORF10835P (100% identity) | M.Cfr110ORF14320P | |
| 14325 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr110DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2205 | DUF2556 family protein | |||
| 2210 | M | M.CfrSA79ORF7225P (100% identity) | ATGCAT | M.Cfr110ORF2210P |
| 2215 | DNA-binding transcriptional regulator Fis | |||
| 7365 | TraR/DksA C4-type zinc finger protein | |||
| 7370 | M | M.Cfr862ORF7370P (100% identity) | M.Cfr110ORF7370P | |
| 7375 | 94 aa hypothetical protein | |||
| 8435 | 224 aa hypothetical protein | |||
| 8440 | M | M.Csp944ORF10665P (100% identity) | M.Cfr110ORF8440P | |
| 8445 | 114 aa hypothetical protein | |||
| 8500 | conserved phage C-terminal domain-containing | |||
| 8505 | M | M.Cfr862ORF8500P (100% identity) | M.Cfr110ORF8505P | |
| 8510 | RusA family crossover junction | |||
| 10305 | phosphohydrolase | |||
| 10310 | M | M.Cfrz4ORF9245P (100% identity) | CCWGG | M.Cfr110ORF10310P |
| 10315 | V | V.CfrMH15ORF11700P (100% identity) | V.Cfr110ORF10310P | |
| 10320 | drug/metabolite exporter YedA | |||
| 21185 | HNH endonuclease | |||
| 21190 | R | Cfr862ORF20900P (100% identity) | Cfr110ORF21190P | |
| 21195 | IS3 family transposase | |||
| plasmid pRHBSTW-00110_2 | ||||
| 24985 | 76 aa hypothetical protein | |||
| 24990 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr110ORF24990P | |
| 24995 | DNA polymerase III subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3255 | 512 aa hypothetical protein | |||
| 3260 | R | Cpo163ORF8830P (100% identity) | Cfr110ORF3265P | |
| 3265 | M | M.Cfr862ORF3265P (100% identity) | M.Cfr110ORF3265P | |
| 3270 | GTPase family protein | |||
| plasmid unnamed | ||||
| 26605 | 125 aa hypothetical protein | |||
| 26610 | R | Cfr862ORF26040P (100% identity) | Cfr110ORF26615P | |
| 26615 | M | M.Cfr862ORF26040P (100% identity) | M.Cfr110ORF26615P | |
| 26620 | 94 aa hypothetical protein | |||