Citrobacter freundii RHBSTW-00084 |
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Putative Citrobacter freundii RHBSTW-00084 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,024,564 bp | CP055588 |
| plasmid pRHBSTW-00084_2: | 335,856 bp | CP055589 |
| plasmid unnamed: | 40,792 bp | CP055590 |
REBASE acronym: Cfr84
Org_num: 42111
All begin HV060_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13860 | ISL3 family transposase | |||
| 13865 | R | LadZ961ORF22445P (100% identity) | Cfr84ORF22450P | |
| 13870 | S | S.LadZ961ORF22445P (100% identity) | S.Cfr84ORF22450P | |
| 13875 | M | M.LadZ961ORF22445P (100% identity) | M.Cfr84ORF22450P | |
| 13880 | carbon-nitrogen hydrolase family protein | |||
| 14275 | M48 family metallopeptidase | |||
| 14280 | R | Cfr862ORF14025P (100% identity) | Cfr84ORF14300P | |
| 14285 | cold shock domain-containing protein | |||
| 14290 | YecA family protein | |||
| 14295 | S | S.Cfr862ORF14025P (100% identity) | S.Cfr84ORF14300P | |
| 14300 | M | M.EcoSHP24ORF10835P (100% identity) | M.Cfr84ORF14300P | |
| 14305 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1650 | cell division protein DamX | |||
| 1655 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr84DamP |
| 1660 | ribulose-phosphate 3-epimerase | |||
| 2195 | DUF2556 family protein | |||
| 2200 | M | M.CfrSA79ORF7225P (100% identity) | ATGCAT | M.Cfr84ORF2200P |
| 2205 | DNA-binding transcriptional regulator Fis | |||
| 7350 | TraR/DksA C4-type zinc finger protein | |||
| 7355 | M | M.Cfr862ORF7370P (100% identity) | M.Cfr84ORF7355P | |
| 7360 | 94 aa hypothetical protein | |||
| 8420 | 224 aa hypothetical protein | |||
| 8425 | M | M.Csp944ORF10665P (100% identity) | M.Cfr84ORF8425P | |
| 8430 | 114 aa hypothetical protein | |||
| 8485 | conserved phage C-terminal domain-containing | |||
| 8490 | M | M.Cfr862ORF8500P (100% identity) | M.Cfr84ORF8490P | |
| 8495 | RusA family crossover junction | |||
| 10290 | phosphohydrolase | |||
| 10295 | M | M.Cfrz4ORF9245P (100% identity) | CCWGG | M.Cfr84ORF10295P |
| 10300 | V | V.CfrMH15ORF11700P (100% identity) | V.Cfr84ORF10295P | |
| 10305 | drug/metabolite exporter YedA | |||
| 21170 | HNH endonuclease | |||
| 21175 | R | Cfr862ORF20900P (100% identity) | Cfr84ORF21175P | |
| 21180 | IS3 family transposase | |||
| plasmid pRHBSTW-00084_2 | ||||
| 24970 | 76 aa hypothetical protein | |||
| 24975 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr84ORF24975P | |
| 24980 | DNA polymerase III subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3245 | 512 aa hypothetical protein | |||
| 3250 | R | Cpo163ORF8830P (100% identity) | Cfr84ORF3255P | |
| 3255 | M | M.Cfr862ORF3265P (100% identity) | M.Cfr84ORF3255P | |
| 3260 | GTPase family protein | |||
| plasmid unnamed | ||||
| 26305 | 125 aa hypothetical protein | |||
| 26310 | R | Cfr862ORF26040P (100% identity) | Cfr84ORF26315P | |
| 26315 | M | M.Cfr862ORF26040P (100% identity) | M.Cfr84ORF26315P | |
| 26320 | 94 aa hypothetical protein | |||