|
Putative Klebsiella grimontii RHBSTW-00054 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,868,667 bp | CP055412 |
plasmid pRHBSTW-00054_2: | 481,290 bp | CP055413 |
plasmid pRHBSTW-00054_3: | 129,961 bp | CP055414 |
plasmid unnamed: | 30,524 bp | CP055415 |
REBASE acronym: Kgr54
Org_num: 42159
All begin HV046_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6385 | IS1 family transposase | |||
6390 | R | KspRE03ORF12040P (100% identity) | Kgr54ORF6400P | |
6395 | S | S.KspRE03ORF12040P (100% identity) | S.Kgr54ORF6400P | |
6400 | M | M.KspRE03ORF12040P (100% identity) | M.Kgr54ORF6400P | |
6405 | transposase | |||
24675 | restriction endonuclease | |||
24680 | M | M.KspM5a1ORF3680P (99% identity) | GGCANNNNNNTTC | M.Kgr54ORF24680P |
24685 | S | S.KspM5a1ORF3680P (100% identity) | GGCANNNNNNTTC | S.Kgr54ORF24680P |
24690 | R | KspM5a1ORF3680P (100% identity) | GGCANNNNNNTTC | Kgr54ORF24680P |
24695 | ATP-binding protein | |||
plasmid pRHBSTW-00054_2 | ||||
29810 | recombinase family protein | |||
29815 | S | S.Ror9155I (97% identity) | S.Kgr54ORF29815P | |
29820 | R | RplS62ORF27425P (100% identity) | Kgr54ORF29815P | |
29825 | IS6-like element IS26 family transposase | |||
30320 | Tn3 family transposase | |||
30325 | M | M.RplS62ORF27425P (99% identity) | M.Kgr54ORF30325P | |
30330 | 122 aa hypothetical protein | |||
plasmid pRHBSTW-00054_3 | ||||
31375 | M48 family metallopeptidase | |||
31380 | R | SmaQC11ORF51970P (100% identity) | GATGNNNNNNTGC | Kgr54ORF30730P |
31385 | YecA family protein | |||
31390 | S | S.Kqu1124ORF26120P (100% identity) | GATGNNNNNNTGC | S.Kgr54ORF30730P |
30730 | M | M.SmaQC11ORF51970P (100% identity) | GATGNNNNNNTGC | M.Kgr54ORF30730P |
30735 | IS1 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1875 | cell division protein DamX | |||
1880 | M | M.PmeBin334DamP (100% identity) | GATC | M.Kgr54DamP |
1885 | ribulose-phosphate 3-epimerase | |||
8035 | 80 aa hypothetical protein | |||
8040 | M | M.Kgr39ORF7940P (100% identity) | M.Kgr54ORF8040P | |
8045 | DUF1133 family protein | |||
10265 | 76 aa hypothetical protein | |||
10270 | M | M.Kpn8050ORF9145P (99% identity) | M.Kgr54ORF10270P | |
10275 | 50 aa hypothetical protein | |||
10460 | drug/metabolite exporter YedA | |||
10465 | V | V.PmeBin334DcmP (100% identity) | V.Kgr54DcmP | |
10470 | M | M.KspMPUS7DcmP (100% identity) | M.Kgr54DcmP | |
10475 | phosphohydrolase | |||
16590 | RusA family crossover junction | |||
??? | M | M.Kgr494ORF6360P (99% identity) | M.Kgr54ORF16595P | |
16600 | 329 aa hypothetical protein | |||
18915 | DUF1133 family protein | |||
18920 | M | M.Kgr634ORF18840P (97% identity) | M.Kgr54ORF18920P | |
18925 | DUF968 domain-containing protein | |||
25055 | DUF262 domain-containing protein | |||
25060 | RM | Kox213ORF25575AP (100% identity) | Kgr54ORF25060P | |
25065 | Reverse transcriptase | |||
25065 | Reverse transcriptase | |||
25070 | RM | Kox213ORF25575BP (100% identity) | Kgr54ORF25070P | |
25075 | BREX-1 system phosphatase PglZ type A | |||
plasmid pRHBSTW-00054_2 | ||||
28640 | thermonuclease family protein | |||
??? | M | M.Ksp484ORF30540P (100% identity) | M.Kgr54ORF28645P | |
28650 | 55 aa hypothetical protein | |||
29220 | DNA-binding protein | |||
29225 | M | M1.SenF8025ORFBP (100% identity) | M.Kgr54ORF29225P | |
29230 | 273 aa hypothetical protein | |||
plasmid pRHBSTW-00054_3 | ||||
30955 | 73 aa hypothetical protein | |||
30960 | M | M.SmaBWH35ORF25885P (100% identity) | M.Kgr54ORF30960P | |
30965 | 67 aa hypothetical protein | |||
plasmid unnamed | ||||
31530 | 145 aa hypothetical protein | |||
31535 | M | M.KpnINF118ORF29135P (97% identity) | M.Kgr54ORF31535P | |
31540 | 151 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24670 | PLP-dependent aminotransferase family protein | |||
24675 | R | KspM5a1MrrP (100% identity) | Kgr54MrrP | |
24680 | type I restriction-modification system subunit |