Ref: Shaw,L.P. unpublished

REBASE ref # 28537

Sequence length:GenBank #:
Chromosome: 5,868,667 bp CP055412
plasmid pRHBSTW-00054_2: 481,290 bp CP055413
plasmid pRHBSTW-00054_3: 129,961 bp CP055414
plasmid unnamed: 30,524 bp CP055415

REBASE acronym: Kgr54

Org_num: 42159

 

All begin HV046_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
6385 IS1 family transposase
6390 R KspRE03ORF12040P (100% identity) Kgr54ORF6400P
6395 S S.KspRE03ORF12040P (100% identity) S.Kgr54ORF6400P
6400 M M.KspRE03ORF12040P (100% identity) M.Kgr54ORF6400P
6405 transposase
 
24675 restriction endonuclease
24680 M M.KspM5a1ORF3680P (99% identity) GGCANNNNNNTTC M.Kgr54ORF24680P
24685 S S.KspM5a1ORF3680P (100% identity) GGCANNNNNNTTC S.Kgr54ORF24680P
24690 R KspM5a1ORF3680P (100% identity) GGCANNNNNNTTC Kgr54ORF24680P
24695 ATP-binding protein
 
plasmid pRHBSTW-00054_2
 
29810 recombinase family protein
29815 S S.Ror9155I (97% identity) S.Kgr54ORF29815P
29820 R RplS62ORF27425P (100% identity) Kgr54ORF29815P
29825 IS6-like element IS26 family transposase
 
30320 Tn3 family transposase
30325 M M.RplS62ORF27425P (99% identity) M.Kgr54ORF30325P
30330 122 aa hypothetical protein
 
plasmid pRHBSTW-00054_3
 
31375 M48 family metallopeptidase
31380 R Sma2637ORF16400P (100% identity) GATGNNNNNNTGC Kgr54ORF30730P
31385 YecA family protein
31390 S S.Kqu1124ORF26120P (100% identity) GATGNNNNNNTGC S.Kgr54ORF30730P
30730 M M.Sma2637ORF25465P (100% identity) GATGNNNNNNTGC M.Kgr54ORF30730P
30735 IS1 family transposase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1875 cell division protein DamX
1880 M M.KspMPUS7DamP (100% identity) GATC M.Kgr54DamP
1885 ribulose-phosphate 3-epimerase
 
8035 80 aa hypothetical protein
8040 M M.Kgr39ORF7940P (100% identity) M.Kgr54ORF8040P
8045 DUF1133 family protein
 
10265 76 aa hypothetical protein
10270 M M.Kpn8050ORF9145P (99% identity) M.Kgr54ORF10270P
10275 50 aa hypothetical protein
 
10460 drug/metabolite exporter YedA
10465 V V.KspMPUS7DcmP (100% identity) V.Kgr54DcmP
10470 M M.KspMPUS7DcmP (100% identity) M.Kgr54DcmP
10475 phosphohydrolase
 
16590 RusA family crossover junction
??? M M.Kgr494ORF6360P (99% identity) M.Kgr54ORF16595P
16600 329 aa hypothetical protein
 
18915 DUF1133 family protein
18920 M M.Kgr634ORF18840P (97% identity) M.Kgr54ORF18920P
18925 DUF968 domain-containing protein
 
25055 DUF262 domain-containing protein
25060 RM KmiB106ORF595P (100% identity) Kgr54ORF25060P
25065 Reverse transcriptase
 
25065 Reverse transcriptase
25070 RM KmiB106ORF610P (100% identity) Kgr54ORF25070P
25075 BREX-1 system phosphatase PglZ type A
 
plasmid pRHBSTW-00054_2
 
28640 thermonuclease family protein
??? M M.Ksp484ORF30540P (100% identity) M.Kgr54ORF28645P
28650 55 aa hypothetical protein
 
29220 DNA-binding protein
29225 M M1.SenF8025ORFBP (100% identity) M.Kgr54ORF29225P
29230 273 aa hypothetical protein
 
plasmid pRHBSTW-00054_3
 
30955 73 aa hypothetical protein
30960 M M.SmaBWH35ORF25885P (100% identity) M.Kgr54ORF30960P
30965 67 aa hypothetical protein
 
plasmid unnamed
 
31530 145 aa hypothetical protein
31535 M M.KpnINF118ORF29135P (97% identity) M.Kgr54ORF31535P
31540 151 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
24670 PLP-dependent aminotransferase family protein
24675 R KspM5a1MrrP (100% identity) Kgr54MrrP
24680 type I restriction-modification system subunit