Klebsiella grimontii RHBSTW-00054 |
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Putative Klebsiella grimontii RHBSTW-00054 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,868,667 bp | CP055412 |
| plasmid pRHBSTW-00054_2: | 481,290 bp | CP055413 |
| plasmid pRHBSTW-00054_3: | 129,961 bp | CP055414 |
| plasmid unnamed: | 30,524 bp | CP055415 |
REBASE acronym: Kgr54
Org_num: 42159
All begin HV046_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6385 | IS1 family transposase | |||
| 6390 | R | KspRE03ORF12040P (100% identity) | Kgr54ORF6400P | |
| 6395 | S | S.KspRE03ORF12040P (100% identity) | S.Kgr54ORF6400P | |
| 6400 | M | M.KspRE03ORF12040P (100% identity) | M.Kgr54ORF6400P | |
| 6405 | transposase | |||
| 24675 | restriction endonuclease | |||
| 24680 | M | M.KspM5a1ORF3680P (99% identity) | GGCANNNNNNTTC | M.Kgr54ORF24680P |
| 24685 | S | S.KspM5a1ORF3680P (100% identity) | GGCANNNNNNTTC | S.Kgr54ORF24680P |
| 24690 | R | KspM5a1ORF3680P (100% identity) | GGCANNNNNNTTC | Kgr54ORF24680P |
| 24695 | ATP-binding protein | |||
| plasmid pRHBSTW-00054_2 | ||||
| 29810 | recombinase family protein | |||
| 29815 | S | S.Ror9155I (97% identity) | S.Kgr54ORF29815P | |
| 29820 | R | RplS62ORF27425P (100% identity) | Kgr54ORF29815P | |
| 29825 | IS6-like element IS26 family transposase | |||
| 30320 | Tn3 family transposase | |||
| 30325 | M | M.RplS62ORF27425P (99% identity) | M.Kgr54ORF30325P | |
| 30330 | 122 aa hypothetical protein | |||
| plasmid pRHBSTW-00054_3 | ||||
| 31375 | M48 family metallopeptidase | |||
| 31380 | R | SmaQC11ORF51970P (100% identity) | GATGNNNNNNTGC | Kgr54ORF30730P |
| 31385 | YecA family protein | |||
| 31390 | S | S.Kqu1124ORF26120P (100% identity) | GATGNNNNNNTGC | S.Kgr54ORF30730P |
| 30730 | M | M.SmaQC11ORF51970P (100% identity) | GATGNNNNNNTGC | M.Kgr54ORF30730P |
| 30735 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1875 | cell division protein DamX | |||
| 1880 | M | M.PmeBin334DamP (100% identity) | GATC | M.Kgr54DamP |
| 1885 | ribulose-phosphate 3-epimerase | |||
| 8035 | 80 aa hypothetical protein | |||
| 8040 | M | M.Kgr39ORF7940P (100% identity) | M.Kgr54ORF8040P | |
| 8045 | DUF1133 family protein | |||
| 10265 | 76 aa hypothetical protein | |||
| 10270 | M | M.Kpn8050ORF9145P (99% identity) | M.Kgr54ORF10270P | |
| 10275 | 50 aa hypothetical protein | |||
| 10460 | drug/metabolite exporter YedA | |||
| 10465 | V | V.PmeBin334DcmP (100% identity) | V.Kgr54DcmP | |
| 10470 | M | M.KspMPUS7DcmP (100% identity) | M.Kgr54DcmP | |
| 10475 | phosphohydrolase | |||
| 16590 | RusA family crossover junction | |||
| ??? | M | M.Kgr494ORF6360P (99% identity) | M.Kgr54ORF16595P | |
| 16600 | 329 aa hypothetical protein | |||
| 18915 | DUF1133 family protein | |||
| 18920 | M | M.Kgr634ORF18840P (97% identity) | M.Kgr54ORF18920P | |
| 18925 | DUF968 domain-containing protein | |||
| 25055 | DUF262 domain-containing protein | |||
| 25060 | RM | Kox213ORF25575AP (100% identity) | Kgr54ORF25060P | |
| 25065 | Reverse transcriptase | |||
| 25065 | Reverse transcriptase | |||
| 25070 | RM | Kox213ORF25575BP (100% identity) | Kgr54ORF25070P | |
| 25075 | BREX-1 system phosphatase PglZ type A | |||
| plasmid pRHBSTW-00054_2 | ||||
| 28640 | thermonuclease family protein | |||
| ??? | M | M.Ksp484ORF30540P (100% identity) | M.Kgr54ORF28645P | |
| 28650 | 55 aa hypothetical protein | |||
| 29220 | DNA-binding protein | |||
| 29225 | M | M1.SenF8025ORFBP (100% identity) | M.Kgr54ORF29225P | |
| 29230 | 273 aa hypothetical protein | |||
| plasmid pRHBSTW-00054_3 | ||||
| 30955 | 73 aa hypothetical protein | |||
| 30960 | M | M.SmaBWH35ORF25885P (100% identity) | M.Kgr54ORF30960P | |
| 30965 | 67 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 31530 | 145 aa hypothetical protein | |||
| 31535 | M | M.KpnINF118ORF29135P (97% identity) | M.Kgr54ORF31535P | |
| 31540 | 151 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24670 | PLP-dependent aminotransferase family protein | |||
| 24675 | R | KspM5a1MrrP (100% identity) | Kgr54MrrP | |
| 24680 | type I restriction-modification system subunit | |||