Escherichia coli RHB05-C22 |
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Putative Escherichia coli RHB05-C22 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,333,970 bp | CP055768 |
| plasmid pRHB05-C22_4: | 108,626 bp | CP055771 |
| plasmid pRHB05-C22_5: | 94,019 bp | CP055772 |
| plasmid unnamed: | 61,141 bp | CP055773 |
REBASE acronym: Eco05C22
Org_num: 42132
All begin HVV88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17925 | DUF4942 domain-containing protein | |||
| 17930 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.Eco05C22ORF17930P |
| 17935 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.Eco05C22ORF17930P |
| 17940 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | Eco05C22ORF17930P |
| 17950 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1730 | cell division protein DamX | |||
| 1735 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco05C22DamP |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco05C22ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 5540 | PerC family transcriptional regulator | |||
| 5545 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco05C22ORF5545P |
| 5550 | LexA family transcriptional regulator | |||
| 9125 | TrmB family transcriptional regulator | |||
| 9130 | M | M.Eco42C22ORF1045P (100% identity) | M.Eco05C22ORF9130P | |
| 9140 | holin | |||
| 13310 | phosphoadenosine phosphosulfate reductase family | |||
| 13315 | M | M.EcoCase2ORF15090P (97% identity) | M.Eco05C22ORF13315P | |
| 13320 | TraR/DksA family transcriptional regulator | |||
| plasmid pRHB05-C22_4 | ||||
| 23155 | 103 aa hypothetical protein | |||
| 23160 | M | M.SspPIBORF23080P (100% identity) | M.Eco05C22ORF23160P | |
| 23165 | 73 aa hypothetical protein | |||
| plasmid pRHB05-C22_5 | ||||
| 24005 | tellurite resistance TerB family protein | |||
| 24020 | M | M.EcoZYB62ORF24960P (100% identity) | M.Eco05C22ORF24020P | |
| 24025 | recombination-associated protein RdgC | |||
| plasmid unnamed | ||||
| 24330 | drug/metabolite exporter YedA | |||
| 24335 | V | V.Ecos195DcmP (100% identity) | V.Eco05C22DcmP | |
| 24340 | M | M.Ecos195DcmP (100% identity) | CCWGG | M.Eco05C22DcmP |
| 24345 | phosphohydrolase | |||