Vibrio owensii 20160513VC2W |
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Putative Vibrio owensii 20160513VC2W RM systems
Ref: Dong,X. et al. unpublished
REBASE ref # 30963
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,056,939 bp | CP030798 |
| chromosome 2: | 2,828,350 bp | CP030799 |
| plasmid p2: | 186,279 bp | CP030801 |
| plasmid p3: | 70,058 bp | CP030802 |
REBASE acronym: VowVC2W
Org_num: 42104
All begin DR996_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5445 | 181 aa hypothetical protein | |||
| 5450 | M | M.Vpa807ORF385P (100% identity) | M.VowVC2WORF5450P | |
| 5455 | S | S.Vpa807ORF385P (99% identity) | S.VowVC2WORF5450P | |
| 5460 | anticodon nuclease | |||
| 5465 | R | Vpa807ORF385P (100% identity) | VowVC2WORF5450P | |
| 5470 | restriction endonuclease | |||
| 7980 | 182 aa hypothetical protein | |||
| 7985 | S | S.Vhaf11ORFCP (50% identity) | S.VowVC2WORF7990P | |
| 7990 | M | M.ValK08M4ORF28840P (88% identity) | M.VowVC2WORF7990P | |
| 7995 | R | VowSH14ORF16660P (97% identity) | VowVC2WORF7990P | |
| 8000 | 80 aa hypothetical protein | |||
| 8530 | integrase | |||
| 8535 | M | M.Val33868II (99% identity) | ACAYNNNNGTC | M.VowVC2WORF8535P |
| 8540 | S | S.Val33868II (99% identity) | ACAYNNNNGTC | S.VowVC2WORF8535P |
| 8545 | 423 aa hypothetical protein | |||
| 8550 | HrgA protein | |||
| 8555 | R | PciZF2ORF19890P (99% identity) | ACAYNNNNGTC | VowVC2WORF8535P |
| 8585 | cytochrome c5 family protein | |||
| 12855 | WYL domain-containing protein | |||
| 12860 | M | M.VowVC2WORF19735P (100% identity) | M.VowVC2WORF12860P | |
| ??? | S | S.VowVC2WORF19735P (100% identity) | S.VowVC2WORF12860P | |
| 12870 | 387 aa hypothetical protein | |||
| 12875 | R | Vfu7ORF12760P (100% identity) | VowVC2WORF12860P | |
| 12880 | ATP-binding protein | |||
| chromosome 2 | ||||
| 19715 | ATP-binding protein | |||
| 19720 | R | VowVC2WORF12860P (99% identity) | VowVC2WORF19735P | |
| 19725 | 387 aa hypothetical protein | |||
| ??? | S | S.VowVC2WORF12860P (100% identity) | S.VowVC2WORF19735P | |
| 19735 | M | M.VowVC2WORF12860P (100% identity) | M.VowVC2WORF19735P | |
| 19740 | WYL domain-containing protein | |||
| 22560 | cell envelope biogenesis protein OmpA | |||
| 22565 | R | PciZF2ORF19890P (99% identity) | ACAYNNNNGTC | VowVC2WORF8535P |
| 22570 | HrgA protein | |||
| 22575 | 423 aa hypothetical protein | |||
| 22580 | S | S.Val33868II (99% identity) | ACAYNNNNGTC | S.VowVC2WORF8535P |
| 22585 | M | M.Val33868II (99% identity) | ACAYNNNNGTC | M.VowVC2WORF8535P |
| 22590 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2060 | 274 aa hypothetical protein | |||
| 2065 | R | VspV1BORF970P (97% identity) | VowVC2WORF2065P | |
| 2070 | phospholipase | |||
| 2395 | helicase | |||
| 2400 | M | M.MloMPLORFAP (79% identity) | M.VowVC2WORF2400P | |
| 2405 | 360 aa hypothetical protein | |||
| 10860 | cell division protein DamX | |||
| 10865 | M | M.Vow5012DamP (98% identity) | GATC | M.VowVC2WDamP |
| 10870 | ribulose-phosphate 3-epimerase | |||
| plasmid p2 | ||||
| 33030 | 327 aa hypothetical protein | |||
| 33035 | R | Vha345IVP (100% identity) | CTGCAG | VowVC2WORF33040P |
| 33040 | M | M.Vha345IV (94% identity) | CTGCAG | M.VowVC2WORF33040P |
| 33045 | DNA repair protein RadC | |||
| 33920 | 80 aa hypothetical protein | |||
| 33925 | M | M.Vpa0051ORF27435P (100% identity) | M.VowVC2WORF33925P | |
| 33930 | 91 aa hypothetical protein | |||
| plasmid p3 | ||||
| 34180 | 366 aa hypothetical protein | |||
| 34185 | M | M.VpaVP17ORF25320P (100% identity) | M.VowVC2WORF34185P | |
| 34190 | IS5 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5465 | type I restriction endonuclease subunit R | |||
| 5470 | R | Vpa807MrrP (100% identity) | VowVC2WMrrP | |
| 5475 | 81 aa hypothetical protein | |||