Raoultella ornithinolytica WP8-W19-CRE-01 |
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Putative Raoultella ornithinolytica WP8-W19-CRE-01 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
| Sequence length: | GenBank #: | |
| Chromosome: | 5,490,896 bp | AP022268 |
| plasmid pWP8-W19-CRE-01_1: | 241,445 bp | AP022269 |
| plasmid pWP8-W19-CRE-01_2: | 148,619 bp | AP022270 |
| plasmid pWP8-W19-CRE-01_4: | 41,197 bp | AP022272 |
REBASE acronym: RorCRE01
Org_num: 42082
All begin WP8W19C01_, WP8W19C01_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 44160 | 262 aa hypothetical protein | |||
| 44170 | R | RspX13ORF22405P (100% identity) | RorCRE01ORF44180P | |
| 44180 | M | M.Ror8M1ORF44410P (100% identity) | M.RorCRE01ORF44180P | |
| 44190 | S | S.Ror8M1ORF44410P (100% identity) | S.RorCRE01ORF44180P | |
| 44200 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3840 | cell division protein DamX | |||
| 3850 | M | M.RspXY1DamP (100% identity) | GATC | M.RorCRE01DamP |
| 3860 | ribulose-phosphate 3-epimerase | |||
| 17560 | phosphohydrolase | |||
| ??? | M | M.Ror8M1DcmP (97% identity) | M.RorCRE01DcmP | |
| 17580 | V | V.Rpl13096DcmP (100% identity) | V.RorCRE01DcmP | |
| 17590 | drug/metabolite exporter YedA | |||
| 30090 | replication endonuclease | |||
| 30100 | M | M.Ror8M1ORF30250P (100% identity) | M.RorCRE01ORF30100P | |
| 30110 | 75 aa hypothetical protein | |||
| 33430 | 52 aa hypothetical protein | |||
| 33440 | M | M1.Ror8M1ORF33640P (100% identity) | M1.RorCRE01ORF33440P | |
| 33450 | M | M2.Ror8M1ORF33640P (100% identity) | M2.RorCRE01ORF33440P | |
| 33460 | 73 aa hypothetical protein | |||
| 45000 | 260 aa hypothetical protein | |||
| 45010 | M | M.Ror8M1ORF45220P (100% identity) | M.RorCRE01ORF45010P | |
| 45020 | ATPase | |||
| plasmid pWP8-W19-CRE-01_2 | ||||
| 21120 | DUF159 family protein | |||
| 21130 | M | M.Ror8M1ORF21190P (100% identity) | M.RorCRE01ORF21130P | |
| 21140 | 82 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pWP8-W19-CRE-01_4 | ||||
| 40170 | 103 aa hypothetical protein | |||
| 40180 | R | Ror8M1ORF10210P (100% identity) | RorCRE01ORF40190P | |
| 40190 | M | M.Ror8M1ORF10210P (100% identity) | M.RorCRE01ORF40190P | |
| 40200 | 94 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 44200 | endoribonuclease SymE | |||
| 44210 | R | Ror8M1McrB2P (100% identity) | RorCRE01McrBP | |
| 44220 | R | Ror8M1McrC2P (100% identity) | RorCRE01McrCP | |
| 44230 | 100 aa hypothetical protein | |||
| plasmid pWP8-W19-CRE-01_1 | ||||
| 12140 | transposase | |||
| 12150 | R | Rte104AMcrBP (100% identity) | RorCRE01McrB2P | |
| 12160 | R | Ror8M1McrCP (100% identity) | RorCRE01McrC2P | |
| 12170 | 62 aa hypothetical protein | |||