Pseudomonas putida WP8-W18-CRE-01 |
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Putative Pseudomonas putida WP8-W18-CRE-01 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
Complete sequence: 5,575,079 bp
GenBank #: AP022227
REBASE acronym: Ppu01
Org_num: 42074
All begin WP8W18C01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20260 | 469 aa hypothetical protein | |||
| 20270 | M | M1.Pas1ORF11035P (98% identity) | M1.Ppu01ORF20270P | |
| 20280 | M | M2.PmeTTORFCP (90% identity) | M2.Ppu01ORF20270P | |
| 20290 | S | S.BpsR733ORF3446P (77% identity) | S.Ppu01ORF20270P | |
| 20300 | R | Pae14687ORFGP (93% identity) | Ppu01ORF20270P | |
| 20310 | ATPase AAA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11500 | 183 aa hypothetical protein | |||
| 11510 | M | M.PsprORF3532P (97% identity) | M.Ppu01ORF11510P | |
| 11520 | 271 aa hypothetical protein | |||
| 12460 | 94 aa hypothetical protein | |||
| 12470 | M | M.Pso5ORF6295P (94% identity) | M.Ppu01ORF12470P | |
| 12480 | 81 aa hypothetical protein | |||
| 12870 | lysis protein | |||
| 12880 | M | M.Psp9349ORF10005P (96% identity) | M.Ppu01ORF12880P | |
| 12890 | phytanoyl-CoA dioxygenase | |||
| 44110 | integrase | |||
| 44120 | RM | PpuMT178ORF23280P (100% identity) | Ppu01ORF44120P | |
| 44130 | 71 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20300 | DEAD/DEAH box helicase | |||
| 20310 | R | Pae973McrBP (97% identity) | Ppu01McrBP | |
| 20320 | R | Pae14687McrCP (96% identity) | Ppu01McrCP | |
| 20330 | 60 aa hypothetical protein | |||