Klebsiella pneumoniae WP4-S18-CRE-04 |
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Putative Klebsiella pneumoniae WP4-S18-CRE-04 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
| Sequence length: | GenBank #: | |
| Chromosome: | 5,361,094 bp | AP022078 |
| plasmid pWP4-S18-CRE-04_1: | 224,088 bp | AP022079 |
| plasmid pWP4-S18-CRE-04_2: | 176,026 bp | AP022080 |
| plasmid pWP4-S18-CRE-04_3: | 55,445 bp | AP022081 |
| plasmid pWP4-S18-CRE-04_4: | 41,162 bp | AP022082 |
REBASE acronym: KpnCRE04
Org_num: 42032
All begin WP4S18C04_, WP4S18C04_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 900 | transposase | |||
| ??? | M | M.KpnYN1ORFEP (100% identity) | CCANNNNNNNRTRTC | M.KpnCRE04ORF910P |
| 930 | S | S.KpnstKP1ORF2492P (99% identity) | CCANNNNNNNRTRTC | S.KpnCRE04ORF910P |
| 940 | 552 aa hypothetical protein | |||
| 8190 | tyrosine recombinase | |||
| 8200 | M | M.EcoK001ORF37120P (100% identity) | M.KpnCRE04ORF32250P | |
| 8210 | S | S.EcoK001ORF37120P (100% identity) | S.KpnCRE04ORF32250P | |
| 8220 | R | EcoK001ORF37120P (100% identity) | KpnCRE04ORF32250P | |
| 8230 | ISL3 family transposase | |||
| plasmid pWP4-S18-CRE-04_1 | ||||
| 12070 | 72 aa hypothetical protein | |||
| 12080 | M | M.SmaQC11ORF51970P (100% identity) | GATGNNNNNNTTG | M.KpnCRE04ORF12080P |
| 12090 | S | S.KvaUORF27290P (100% identity) | GATGNNNNNNTTG | S.KpnCRE04ORF12080P |
| 12100 | 227 aa hypothetical protein | |||
| 12110 | R | SmaQC11ORF51970P (100% identity) | GATGNNNNNNTTG | KpnCRE04ORF12080P |
| 12120 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3750 | cell division protein DamX | |||
| 3760 | M | M.KspC31DamP (100% identity) | GATC | M.KpnCRE04DamP |
| 3770 | ribulose-phosphate 3-epimerase | |||
| 17110 | phosphohydrolase | |||
| ??? | M | M.Kqu6DcmP (82% identity) | CCWGG | M.KpnCRE04DcmP |
| 17130 | V | V.KpnsKP3ORFEP (75% identity) | V.KpnCRE04DcmP | |
| 17140 | drug/metabolite exporter YedA | |||
| 18650 | 37 aa hypothetical protein | |||
| 18660 | M | M1.Kpn0018ORF10765P (99% identity) | M1.KpnCRE04ORF18660P | |
| 18670 | M | M.KpnF931ORF7345P (98% identity) | M2.KpnCRE04ORF18660P | |
| 18680 | 142 aa hypothetical protein | |||
| 26970 | 199 aa hypothetical protein | |||
| 26980 | M | M.KpnYN1ORFCP (100% identity) | M.KpnCRE04ORF26980P | |
| 26990 | 102 aa hypothetical protein | |||
| 29350 | phage-related exonuclease | |||
| 29360 | M | M.Kpnu28ORF20920P (100% identity) | M.KpnCRE04ORF29360P | |
| 29370 | 73 aa hypothetical protein | |||
| plasmid pWP4-S18-CRE-04_1 | ||||
| 11360 | 76 aa hypothetical protein | |||
| 11370 | M | M.Kva568ORF28105P (100% identity) | M.KpnCRE04ORF11370P | |
| 11380 | 73 aa hypothetical protein | |||
| plasmid pWP4-S18-CRE-04_2 | ||||
| 20770 | 100 aa hypothetical protein | |||
| 20780 | M | M.YrupYR1ORFCP (100% identity) | M.KpnCRE04ORF20780P | |
| 20790 | 143 aa hypothetical protein | |||
| plasmid pWP4-S18-CRE-04_3 | ||||
| 30380 | 88 aa hypothetical protein | |||
| ??? | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.KpnCRE04ORF30390P |
| 30400 | R | YpsR1ORFAP (99% identity) | CCWGG | KpnCRE04ORF30390P |
| 30410 | IS6 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pWP4-S18-CRE-04_4 | ||||
| 40290 | 348 aa hypothetical protein | |||
| 40300 | M | M.RorCRE01ORF40190P (100% identity) | M.KpnCRE04ORF40300P | |
| 40310 | R | Kpn22265ORF26485P (100% identity) | KpnCRE04ORF40300P | |
| 40320 | 52 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24030 | 74 aa hypothetical protein | |||
| 24040 | R | KpnP062MrrP (100% identity) | KpnCRE04MrrP | |
| 24050 | deoxygluconate dehydrogenase | |||