Escherichia coli WCHEC035123 |
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Putative Escherichia coli WCHEC035123 RM systems
Ref: Ma,K. et al. unpublished
REBASE ref # 30928
| Sequence length: | GenBank #: | |
| Chromosome: | 4,692,428 bp | CP058651 |
| plasmid p1_035123: | 154,098 bp | CP058653 |
| plasmid p2_035123: | 89,623 bp | CP058654 |
REBASE acronym: Eco35123
Org_num: 41983
All begin HZR24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5700 | IS1 family transposase | |||
| 5705 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco35123ORF5715P |
| 5710 | S | S.Eco35148ORF7765P (100% identity) | ACAYNNNNCTG | S.Eco35123ORF5715P |
| 5715 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco35123ORF5715P |
| 5720 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | cell division protein DamX | |||
| 1795 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco35123DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2415 | DUF2556 family protein | |||
| 2420 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco35123ORF2420P |
| 2425 | tyrosine-type recombinase/integrase | |||
| 8865 | phosphohydrolase | |||
| 8870 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco35123DcmP |
| 8875 | V | V.EcosEC7DcmP (100% identity) | V.Eco35123DcmP | |
| 8880 | drug/metabolite exporter YedA | |||
| 18990 | phage lysis protein EssD | |||
| 18995 | M | M.Eco35148ORF21985P (100% identity) | M.Eco35123ORF18995P | |
| 19000 | 67 aa hypothetical protein | |||
| 19030 | LexA family transcriptional regulator | |||
| 19035 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco35123ORF19035P |
| 19040 | PerC family transcriptional regulator | |||
| plasmid p1_035123 | ||||
| 23495 | 73 aa hypothetical protein | |||
| 23500 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco35123ORF23500P | |
| 23505 | 102 aa hypothetical protein | |||
| plasmid p2_035123 | ||||
| 23780 | glutamine--tRNA ligase | |||
| 23785 | M | M.EcoJS316ORF22690P (100% identity) | M.Eco35123ORF23785P | |
| 23790 | 226 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12965 | isocitrate dehydrogenase | |||
| 12970 | R | EcosEC27McrCP (100% identity) | Eco35123McrCP | |
| 12975 | R | EcoteDMcrBP (100% identity) | Eco35123McrBP | |
| 12980 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14540 | replication endonuclease | |||
| 14545 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco35123ORF14545P |
| 14550 | TraR/DksA family transcriptional regulator | |||