Deinococcus species D7000 |
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Putative Deinococcus species D7000 RM systems
Ref: Zhang,R. et al. unpublished
REBASE ref # 30921
| Sequence length: | GenBank #: | |
| Chromosome: | 3,492,515 bp | CP058534 |
| plasmid p_1: | 359,763 bp | CP058535 |
| plasmid p_3: | 164,952 bp | CP058537 |
| plasmid p_5: | 44,524 bp | CP058539 |
| plasmid p_6: | 24,947 bp | CP058540 |
REBASE acronym: DspD7000
Org_num: 41966
All begin HLB42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p_1 | ||||
| 18460 | 206 aa hypothetical protein | |||
| 18465 | M | M.DspVB142ORF18170P (80% identity) | M.DspD7000ORF18465P | |
| 18470 | S | S.DwuR12ORF15905P (81% identity) | S.DspD7000ORF18465P | |
| 18475 | ISL3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8980 | DEAD/DEAH box helicase family protein | |||
| 8985 | RM | DswDY59ORF8595P (46% identity) | DspD7000ORF8985P | |
| 8990 | IS4 family transposase | |||
| 13945 | 84 aa hypothetical protein | |||
| 13950 | M | M.DspD7000ORF21675P (100% identity) | M.DspD7000ORF13950P | |
| 13955 | 94 aa hypothetical protein | |||
| 16410 | 64 aa hypothetical protein | |||
| 16415 | M | M.DswDY59ORF5065P (79% identity) | M.DspD7000ORF16415P | |
| 16420 | ATP-binding protein | |||
| plasmid p_3 | ||||
| 20515 | DUF4935 domain-containing protein | |||
| 20520 | RM | DgoI0ORF279P (25% identity) | DspD7000ORF20520P | |
| 20525 | 317 aa hypothetical protein | |||
| plasmid p_5 | ||||
| 21670 | 84 aa hypothetical protein | |||
| 21675 | M | M.DspD7000ORF13950P (100% identity) | M.DspD7000ORF21675P | |
| 21680 | 94 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16035 | 202 aa hypothetical protein | |||
| 16040 | M | M.DspAJ005ORF3045P (74% identity) | M.DspD7000ORF16040P | |
| 16045 | polyphosphate kinase 2 family protein | |||
| plasmid p_6 | ||||
| 21760 | recombinase family protein | |||
| 21765 | R | PspAPM04ORF11105P (45% identity) | DspD7000ORF21770P | |
| 21770 | M | M.MspCY2I (55% identity) | M.DspD7000ORF21770P | |
| 21775 | ParA family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9010 | 220 aa hypothetical protein | |||
| 9015 | R | DspNW56McrBP (21% identity) | DspD7000McrBP | |
| 9020 | R | DspRLMcrCP (57% identity) | DspD7000McrCP | |
| 9025 | alpha/beta fold hydrolase | |||