Ref: Veeraraghavan,B. et al. unpublished

REBASE ref # 30840

Sequence length:GenBank #:
Chromosome: 5,356,693 bp CP058798
plasmid pIncFIBK: 102,871 bp CP058800
plasmid pIncFII: 97,004 bp CP058801
plasmid punnamed_VBA27935: 5,813 bp CP058803
plasmid pvirulence_VBA27935: 304,108 bp CP058799

REBASE acronym: Kpn27935

Org_num: 42029

 

All begin HBJ32_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
1335 helix-turn-helix domain-containing protein
1340 R Sma1978ORFBP (100% identity) ACGNNNNNGTTG Kpn27935ORF1365P
1345 histidinol-phosphatase
1350 DNA binding domain-containing protein
1355 S S.Sma1978ORFBP (100% identity) ACGNNNNNGTTG S.Kpn27935ORF1365P
1360 AAA family ATPase
1365 M M.Sma1978ORFBP (100% identity) ACGNNNNNGTTG M.Kpn27935ORF1365P
1370 400 aa hypothetical protein
 
22815 S S.KpnU41ORF12590P (100% identity) ACANNNNNNNNTGAC S.Kpn27935ORF22820P
22820 M M.KpnU41ORF12590P (100% identity) ACANNNNNNNNTGAC M.Kpn27935ORF22820P
22825 R Ksp1954ORF11460P (100% identity) ACANNNNNNNNTGAC Kpn27935ORF22820P
22830 integrase arm-type DNA-binding domain-containing
 
plasmid pIncFIBK
 
27460 M48 family metallopeptidase
27465 R Sma2637ORF16400P (100% identity) GATGNNNNNNTTG Kpn27935ORF27480P
27470 YecA family protein
27475 S S.Kva2757ORF27000P (100% identity) GATGNNNNNNTTG S.Kpn27935ORF27480P
27480 M M.Sma2637ORF25465P (100% identity) GATGNNNNNNTTG M.Kpn27935ORF27480P
27485 IS1 family transposase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1870 cell division protein DamX
1875 M M.Kpns65DamP (100% identity) GATC M.Kpn27935DamP
1880 ribulose-phosphate 3-epimerase
 
9180 phosphohydrolase
??? M M.KpnU41ORF25645P (82% identity) CCWGG M.Kpn27935ORF9185P
9190 very short patch repair endonuclease
 
??? dcm
9190 V V.KspC31DcmP (75% identity) V.Kpn27935DcmP
9195 drug/metabolite exporter YedA
 
9460 75 aa hypothetical protein
9465 M M.Kpns1ORF24835P (100% identity) M.Kpn27935ORF9465P
9470 YqaJ viral recombinase family protein
 
plasmid pIncFII
 
28090 102 aa hypothetical protein
28095 M M.SenST46ORF25580P (100% identity) M.Kpn27935ORF28095P
28100 73 aa hypothetical protein
 
plasmid punnamed_VBA27935
 
28480 Rop family plasmid primer RNA-binding protein
28485 R KpnDJORFGP (95% identity) CCNGG Kpn27935ORF28490P
28490 M M.SflFF34ORF24420P (100% identity) CCNGG M.Kpn27935ORF28490P
28495 MbeD family mobilization/exclusion protein
 
plasmid pvirulence_VBA27935
 
27240 DNA replication protein DnaC
27245 M M.Ksp1927ORF27750P (100% identity) M.Kpn27935ORF27245P
27250 R Kpns1ORF26015P (100% identity) Kpn27935ORF27245P
27255 82 aa hypothetical protein
 
27320 170 aa hypothetical protein
27325 M M.Kqu610ORF26075P (100% identity) M.Kpn27935ORF27325P
27330 1126 aa hypothetical protein