Agrobacterium vitis VAR06-30 |
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Putative Agrobacterium vitis VAR06-30 RM systems
Ref: Kawaguchi,A. J. Gen. Plant Pathol. 77, 299-303 (2011)
REBASE ref # 30811
Complete sequence: 3,769,447 bp
GenBank #: AP023272
REBASE acronym: Avi630
Org_num: 41652
All begin RvVAR0630_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 34260 | 60 aa hypothetical protein | |||
| 34270 | R | Avi31ORF8170P (93% identity) | Avi630ORF34300P | |
| 34280 | 343 aa hypothetical protein | |||
| ??? | S | S.PbaS2ORF12770P (41% identity) | S.Avi630ORF34300P | |
| 34300 | M | M.Avi31ORF8170P (95% identity) | M.Avi630ORF34300P | |
| 34310 | fimbrial protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13350 | 326 aa hypothetical protein | |||
| 13360 | M | M.RleWORF4938P (93% identity) | M.Avi630ORF13360P | |
| 13370 | 356 aa hypothetical protein | |||
| 16220 | 74 aa hypothetical protein | |||
| 16230 | M | M.Avi39ORF4170P (20% identity) | M1.Avi630ORF16230P | |
| 16240 | M | M.Avi39ORF4170P (63% identity) | M2.Avi630ORF16230P | |
| 16250 | RM | M.SfrGR64ORFEP (77% identity) | Avi630ORF16230P | |
| 16260 | SIMPL domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30810 | 618 aa hypothetical protein | |||
| ??? | M | M.AviS4ORF1084P (94% identity) | M.Avi630ORF30820P | |
| 30830 | (2Fe-2S) ferredoxin | |||