Ref: Li,F.-W. unpublished

REBASE ref # 30582

Sequence length:GenBank #:
Chromosome: 7,828,336 bp CP040272
plasmid pC052_A: 541,557 bp CP040273
plasmid pC052_B: 336,425 bp CP040274
plasmid pC052_C: 298,931 bp CP040275
plasmid pC052_D: 278,779 bp CP040276
plasmid pC052_E: 232,629 bp CP040277
plasmid pC052_F: 223,442 bp CP040278

REBASE acronym: NspC052

Org_num: 41741

 

All begin FD723_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
8190 107 aa hypothetical protein
8195 M M.AvaORF499P (90% identity) M.NspC052ORF8195P
8200 S S.Dsp964ORF3328P (33% identity) S.NspC052ORF8195P
8205 R Osp6506ORF1610003P (90% identity) NspC052ORF8195P
8210 CHAT domain-containing protein
 
25320 sporulation/spore germination protein
25330 S S.Nsp24002ORF20290P (28% identity) S.NspC052ORF25330P
25335 IS630 family transposase
25340 type II toxin-antitoxin system RelE/ParE family
25345 R NpuORF4898P (64% identity) NspC052ORF25330P
25350 72 aa hypothetical protein
 
27345 type I-MYXAN CRISPR-associated protein
27350 R Tte7101ORF41340P (93% identity) NspC052ORF27360P
27355 210 aa hypothetical protein
27360 M M.AvaXI (97% identity) M.NspC052ORF27360P
27365 S S.CwaWHORF5967P (31% identity) S.NspC052ORF27360P
27370 HAMP domain-containing histidine kinase
 
plasmid pC052_A
 
32355 64 aa hypothetical protein
32360 M M1.Nsp24002ORF11300P (95% identity) M.NspC052ORF32360P
32365 354 aa hypothetical protein
32370 S S.SspHK05ORF54260P (53% identity) S.NspC052ORF32360P
32375 DUF4433 domain-containing protein
32380 506 aa hypothetical protein
32385 R Nsp24002ORF11300P (94% identity) NspC052ORF32360P
32390 M48 family metallopeptidase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
2585 GGDEF domain-containing protein
2590 M M.Nsp7107ORF2657P (85% identity) M.NspC052ORF2590P
2595 site-2 protease family protein
 
8250 MerR family transcriptional regulator
8255 M M.DspB1220ORF4175P (80% identity) M.NspC052ORF8255P
8260 IS630 family transposase
8265 R Ned1411ORF28475P (80% identity) NspC052ORF8255P
8270 168 aa hypothetical protein
 
9365 lipid-A-disaccharide synthase
9370 M M.Ned1411ORF12695P (93% identity) M.NspC052ORF9370P
9375 123 aa hypothetical protein
 
12025 DUF4351 domain-containing protein
12030 RM Oni7112ORF6389P (38% identity) NspC052ORF12030P
12035 IS982 family transposase
 
13725 photosystem II q(b) protein
13730 M M.NflNUN1ORF4597P (94% identity) M.NspC052ORF13730P
13735 70 aa hypothetical protein
 
18340 deoxyribose-phosphate aldolase
18345 M M.Ncf36ORF36150P (88% identity) M.NspC052ORF18345P
18350 colanic acid biosynthesis glycosyltransferase
 
18975 DNA phosphorothioation-associated protein 4
18980 R NspNUC1ORF2892P (87% identity) NspC052ORF18980P
18985 DGQHR domain-containing protein
 
18985 DGQHR domain-containing protein
18990 M M.NspNUC1DndCP (98% identity) M.NspC052DndCP
18995 IS200/IS605 family transposase
 
18995 IS200/IS605 family transposase
19000 M M.NspN6DndDP (97% identity) M.NspC052DndDP
19005 DNA sulfur modification protein DndE
 
19000 DNA sulfur modification protein DndD
19005 M M.NspNUC1DndEP (100% identity) M.NspC052DndEP
19010 DNA phosphorothioation-associated putative
 
23345 157 aa hypothetical protein
23350 M M.Ned1411ORF29345P (93% identity) M.NspC052ORF23350P
23355 anthranilate phosphoribosyltransferase
 
26500 DUF4912 domain-containing protein
26505 M M.NspNUC1ORF5824P (43% identity) M.NspC052ORF26505P
26510 R PprC007ORFHP (74% identity) NspC052ORF26505P
26515 4-hydroxy-3-methylbut-2-enyl diphosphate
 
29805 158 aa hypothetical protein
29810 M M.Ncf36ORF43400P (92% identity) M.NspC052ORF29810P
29815 DUF751 family protein
 
31525 precorrin-3B C(17)-methyltransferase
31530 R NspN6ORF5139P (98% identity) NspC052ORF31535P
31535 M M.NspNUC1ORF527P (96% identity) M.NspC052ORF31535P
31540 129 aa hypothetical protein
 
plasmid pC052_A
 
32925 DUF1392 domain-containing protein
32930 M M.NflNUN1ORF9823P (73% identity) M.NspC052ORF32930P
32935 132 aa hypothetical protein
 
33340 80 aa hypothetical protein
33345 M M.Nli25ORF37340P (90% identity) M.NspC052ORF33345P
33350 R NcoHK02ORF31240P (89% identity) NspC052ORF33345P
33355 71 aa hypothetical protein
 
33995 ASCH domain-containing protein
34000 M M.NspC057ORF40145P (65% identity) M.NspC052ORF34000P
34005 71 aa hypothetical protein
 
plasmid pC052_B
 
35360 306 aa hypothetical protein
35365 M M.Cpa267ORF40590P (68% identity) M.NspC052ORF35365P
35370 664 aa hypothetical protein
 
plasmid pC052_C
 
36305 62 aa hypothetical protein
36310 M M.NspC057ORF40145P (92% identity) M.NspC052ORF36310P
36315 ASCH domain-containing protein
 
36345 cytosolic protein
36350 M M.NcoHK02ORF67460P (91% identity) M.NspC052ORF36350P
36355 152 aa hypothetical protein
 
36520 translation initiation factor IF-2
36525 RM NpuORF5660P (83% identity) NspC052ORF36525P
36530 BREX system P-loop protein BrxC
 
plasmid pC052_D
 
37495 isopentenyl phosphate kinase family protein
37500 M M.NspN6ORF2172P (83% identity) M.NspC052ORF37500P
37505 ASCH domain-containing protein
 
plasmid pC052_E
 
38790 DUF3155 domain-containing protein
38795 M M.Sto61278ORF24015P (89% identity) M.NspC052ORF38795P
38800 R Bse114ORF33975P (86% identity) NspC052ORF38795P
38805 ImmA/IrrE family metallo-endopeptidase
 
plasmid pC052_F
 
39805 72 aa hypothetical protein
39810 M M.AspAR120ORF46P (23% identity) M.NspC052ORF39810P
39815 222 aa hypothetical protein
 
40070 204 aa hypothetical protein
40075 M M.Csp8801ORF1989P (18% identity) M.NspC052ORF40075P
40080 172 aa hypothetical protein