Vibrio parahaemolyticus LVP1 |
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Putative Vibrio parahaemolyticus LVP1 RM systems
Ref: Li,J. unpublished
REBASE ref # 26485
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,478,693 bp | CP040100 |
| chromosome 2: | 1,831,942 bp | CP040099 |
REBASE acronym: VpaLVP1
Org_num: 41791
All begin FDP11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 17930 | 706 aa hypothetical protein | |||
| 17935 | R | Vha1164ORFCP (98% identity) | VpaLVP1ORF17955P | |
| 17940 | DUF262 domain-containing protein | |||
| 17945 | DUF262 domain-containing protein | |||
| 17950 | S | S.PalBan1ORFAP (77% identity) | S.VpaLVP1ORF17955P | |
| 17955 | M | M.Afi5LCORFBP (97% identity) | M.VpaLVP1ORF17955P | |
| 17960 | 687 aa hypothetical protein | |||
| 21505 | helix-turn-helix transcriptional regulator | |||
| 21510 | R | VvuMO6ORF1791P (97% identity) | VpaLVP1ORF21550P | |
| 21515 | 449 aa hypothetical protein | |||
| 21520 | site-specific DNA-methyltransferase | |||
| 21525 | 93 aa hypothetical protein | |||
| 21530 | elongation factor Ts | |||
| 21535 | 49 aa hypothetical protein | |||
| 21540 | 36 aa hypothetical protein | |||
| 21545 | 132 aa hypothetical protein | |||
| 21550 | M | M.VpaK32ORFCP (99% identity) | M.VpaLVP1ORF21550P | |
| 21555 | S | S.Vca283ORFFP (70% identity) | S.VpaLVP1ORF21550P | |
| 21560 | WYL domain-containing protein | |||
| 22815 | 346 aa hypothetical protein | |||
| 22820 | R | Vpa52IP (99% identity) | VpaLVP1ORF22835P | |
| 22825 | 250 aa hypothetical protein | |||
| 22830 | S | S.PalEH1III (84% identity) | S.VpaLVP1ORF22835P | |
| 22835 | M | M.Vpa52I (96% identity) | M.VpaLVP1ORF22835P | |
| 22840 | 114 aa hypothetical protein | |||
| chromosome 2 | ||||
| 2265 | restriction endonuclease | |||
| 2270 | R | Vpa3112ORFAP (100% identity) | VpaLVP1ORF2290P | |
| 2275 | S | S.Vpa3112ORFAP (99% identity) | S.VpaLVP1ORF2290P | |
| 2280 | chromosome segregation protein SMC | |||
| 2285 | HNH endonuclease | |||
| 2290 | M | M.Vpa3112ORFAP (100% identity) | M.VpaLVP1ORF2290P | |
| 2295 | 439 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 10025 | cell division protein DamX | |||
| 10030 | M | M.VphVPD14DamP (100% identity) | GATC | M.VpaLVP1DamP |
| 10035 | ribulose-phosphate 3-epimerase | |||
| 15590 | 81 aa hypothetical protein | |||
| 15595 | M | M.VpaMAVPQORF8980P (100% identity) | M.VpaLVP1ORF15595P | |
| 15600 | 158 aa hypothetical protein | |||
| 21515 | 449 aa hypothetical protein | |||
| 21520 | M | M.VpaX1ORF4540P (99% identity) | M.VpaLVP1ORF21520P | |
| 21525 | 93 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 2260 | helix-turn-helix domain-containing protein | |||
| 2265 | R | VpaBM26AMrrP (99% identity) | VpaLVP1MrrP | |
| 2270 | DEAD/DEAH box helicase | |||