Bifidobacterium longum subsp. longum YS108R |
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Putative Bifidobacterium longum subsp. longum YS108R RM systems
Ref: Yan,S. and Yang,B. unpublished
REBASE ref # 30819
Complete sequence: 2,520,995 bp
GenBank #: CP029796
REBASE acronym: Blo108R
Org_num: 41660
All begin DND34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 855 | DUF805 domain-containing protein | |||
| 860 | R | Blo10002IP (100% identity) | GAGNNNNNNGTAY | Blo108RORF880P |
| 865 | DNA-binding protein | |||
| 870 | S | S.BloBOORF1015P (100% identity) | GAGNNNNNNGTAY | S.Blo108RORF880P |
| 875 | 257 aa hypothetical protein | |||
| 880 | M | M.BloBOORF1015P (100% identity) | GAGNNNNNNGTAY | M.Blo108RORF880P |
| 885 | glutamate--tRNA ligase | |||
| 8635 | methionine adenosyltransferase | |||
| 8640 | R | BloK5ORF7835P (100% identity) | Blo108RORF8655P | |
| 8645 | AAA family ATPase | |||
| 8650 | S | S3.Blo35BORF325P (100% identity) | S1.Blo108RORF8655P | |
| 8655 | M | M.Blo35BORF325P (100% identity) | M.Blo108RORF8655P | |
| ??? | S | S2.BloLC67ORFBP (65% identity) | S2.Blo108RORF8655P | |
| 8675 | site-specific integrase | |||
| 8680 | S | S3.Blo517ORF8270P (100% identity) | S4.Blo108RORF8655P | |
| 8685 | isoleucine--tRNA ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3670 | 466 aa hypothetical protein | |||
| 3675 | M | M.BloBL16ORFAP (75% identity) | TCGGCCGA | M.Blo108RORF3675P |
| 3680 | 103 aa hypothetical protein | |||
| 6735 | 54 aa hypothetical protein | |||
| 6740 | M | M.Blo114494ORF6320P (99% identity) | CCWGG | M.Blo108RORF6740P |
| 6745 | R | Blo5915ORF8560P (100% identity) | CCWGG | Blo108RORF6740P |
| 6750 | 80 aa hypothetical protein | |||