Escherichia coli AMSCJX03 |
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Putative Escherichia coli AMSCJX03 RM systems
Ref: Ji,X. unpublished
REBASE ref # 26874
| Sequence length: | GenBank #: | |
| Chromosome: | 4,618,346 bp | CP058355 |
| plasmid pAMPD1: | 112,466 bp | CP058356 |
| plasmid pAMPD2: | 88,999 bp | CP058357 |
REBASE acronym: EcoJX03
Org_num: 41688
All begin HXS77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18995 | adenine/cytosine-specific restriction | |||
| 19000 | R | EcoH58ORFEP (99% identity) | EcoJX03ORF19005P | |
| 19005 | M | M.Eco6563ORF18095P (100% identity) | M.EcoJX03ORF19005P | |
| 19010 | S | S.Eco4BL08ORF39860P (29% identity) | S.EcoJX03ORF19005P | |
| 19015 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.EcoSTEC413DamP (100% identity) | GATC | M.EcoJX03DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2330 | DUF2556 family protein | |||
| 2335 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoJX03ORF2335P |
| 2340 | DNA-binding transcriptional regulator Fis | |||
| 8745 | phosphohydrolase | |||
| 8750 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoJX03DcmP |
| 8755 | V | V.EcoSFE8DcmP (100% identity) | V.EcoJX03DcmP | |
| 8760 | drug/metabolite exporter YedA | |||
| plasmid pAMPD2 | ||||
| 22790 | 73 aa hypothetical protein | |||
| 22795 | M | M.SenST46ORF25580P (100% identity) | M.EcoJX03ORF22795P | |
| 22800 | 102 aa hypothetical protein | |||
| 22890 | IS1 family transposase | |||
| 22895 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.EcoJX03ORF22895P |
| 22900 | R | Ssp3CORF24390P (100% identity) | CCWGG | EcoJX03ORF22895P |
| 22905 | IS6-like element IS26 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18990 | GTPase | |||
| 18995 | R | Ssp28760MrrP (99% identity) | EcoJX03MrrP | |
| 19000 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pAMPD1 | ||||
| 22580 | 76 aa hypothetical protein | |||
| 22585 | M | M.Sso524ORF460P (100% identity) | M.EcoJX03ORF22585P | |
| 22590 | 269 aa hypothetical protein | |||