Salmonella enterica subsp. enterica serovar Newport VNSEC023 |
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Putative Salmonella enterica subsp. enterica serovar Newport VNSEC023 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 30862
| Sequence length: | GenBank #: | |
| Chromosome: | 4,680,581 bp | CP039437 |
| plasmid pCFSAN086837: | 255,725 bp | CP039438 |
REBASE acronym: SenC023
Org_num: 41778
All begin E8N12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19595 | 322 aa hypothetical protein | |||
| 19600 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | SenC023ORF19605P |
| 19605 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.SenC023ORF19605P |
| 19610 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.SenC023ORF19605P |
| 19615 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.StyTDamP (100% identity) | GATC | M.SenC023DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 domain-containing protein | |||
| 2235 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC023ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 8930 | phosphohydrolase | |||
| 8935 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenC023DcmP |
| 8940 | V | V.StyTDcmP (100% identity) | V.SenC023DcmP | |
| 8945 | drug/metabolite exporter YedA | |||
| 13940 | DUF550 domain-containing protein | |||
| 13945 | M | M.Sen79101ORF11735P (100% identity) | M.SenC023ORF13945P | |
| 13950 | adenine methylase | |||
| 13945 | class I SAM-dependent methyltransferase | |||
| 13950 | M | M.Sen79101ORF11740P (100% identity) | M.SenC023ORF13950P | |
| 13955 | 82 aa hypothetical protein | |||
| 19740 | YebC/PmpR family DNA-binding transcriptional | |||
| 19745 | R | SenZYXORFBP (100% identity) | SenC023ORF19745P | |
| 19750 | integrase | |||
| plasmid pCFSAN086837 | ||||
| 23155 | thermonuclease family protein | |||
| 23160 | M | M.YpsF1ORFCP (100% identity) | M.SenC023ORF23160P | |
| 23165 | DUF1173 domain-containing protein | |||
| 23770 | 284 aa hypothetical protein | |||
| 23775 | M | M.YpsF1ORFDP (100% identity) | M.SenC023ORF23775P | |
| 23780 | DNA-binding protein | |||
| 23880 | 202 aa hypothetical protein | |||
| 23885 | M | M.YpsF1ORFBP (100% identity) | M.SenC023ORF23885P | |
| 23890 | 108 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17455 | 33 aa hypothetical protein | |||
| 17460 | R | SenZYXORFDP (99% identity) | CAGAG | SenC023ORF17465P |
| 17465 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.SenC023ORF17465P |
| 17470 | MFS transporter | |||