Salmonella enterica subsp. enterica serovar Heidelberg CVM N53023 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg CVM N53023 RM systems
Ref: Tyson,G.H. et al. Antimicrob. Agents Chemother. (2020) In press
REBASE ref # 30787
| Sequence length: | GenBank #: | |
| Chromosome: | 4,821,913 bp | CP049310 |
| plasmid pN53023: | 339,705 bp | CP049311 |
REBASE acronym: Sen53023
Org_num: 41498
All begin APM70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19940 | restriction endonuclease | |||
| 19945 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen53023ORF19950P |
| 19950 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen53023ORF19950P |
| 19955 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen53023ORF19950P |
| 19960 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1880 | cell division protein DamX | |||
| 1885 | M | M.StyTDamP (100% identity) | GATC | M.Sen53023DamP |
| 1890 | ribulose-phosphate 3-epimerase | |||
| 2370 | DUF2556 family protein | |||
| 2375 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen53023ORF2375P |
| 2380 | DNA-binding transcriptional regulator Fis | |||
| 9220 | phosphohydrolase | |||
| 9225 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen53023DcmP |
| 9230 | V | V.StyTDcmP (100% identity) | V.Sen53023DcmP | |
| 9235 | drug/metabolite exporter YedA | |||
| 14305 | YqaJ viral recombinase family protein | |||
| ??? | M | M.SenS321ORF16155P (100% identity) | GATC | M.Sen53023ORF14310P |
| 14315 | DUF4060 family protein | |||
| 20080 | YebC/PmpR family DNA-binding transcriptional | |||
| 20085 | R | Sens12373ORF19550P (100% identity) | Sen53023ORF20085P | |
| 20090 | fosfomycin resistance glutathione transferase | |||
| 20110 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen53023ORF20110P |
| 20115 | DEAD/DEAH box helicase | |||
| plasmid pN53023 | ||||
| 23685 | 55 aa hypothetical protein | |||
| 23690 | M | M.Ssp15303DcmP (100% identity) | M.Sen53023Dcm2P | |
| 23695 | thermonuclease family protein | |||
| 24435 | 106 aa hypothetical protein | |||
| 24440 | M | M.Ssp15303ORFDP (100% identity) | M.Sen53023ORF24440P | |
| 24445 | 202 aa hypothetical protein | |||
| 24565 | DNA-binding protein | |||
| 24570 | M | M.Ssp15303ORFEP (100% identity) | M.Sen53023ORF24570P | |
| 24575 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17375 | 33 aa hypothetical protein | |||
| 17380 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen53023ORF17385P |
| 17385 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen53023ORF17385P |
| 17390 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19935 | BrnT family toxin | |||
| 19940 | R | StyUK1MrrP (100% identity) | Sen53023MrrP | |
| 19945 | type I restriction-modification system | |||