|
Putative Salmonella enterica subsp. enterica serovar Heidelberg CVM N58631 RM systems
Ref: Tyson,G.H. et al. Antimicrob. Agents Chemother. (2020) In press
REBASE ref # 30787
Sequence length: | GenBank #: | |
Chromosome: | 4,782,639 bp | CP049306 |
plasmid p58631: | 338,024 bp | CP049307 |
REBASE acronym: Sen58631
Org_num: 41499
All begin BCP05_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19630 | restriction endonuclease | |||
19635 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen58631ORF19640P |
19640 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen58631ORF19640P |
19645 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen58631ORF19640P |
19650 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1880 | cell division protein DamX | |||
1885 | M | M.StyTDamP (100% identity) | GATC | M.Sen58631DamP |
1890 | ribulose-phosphate 3-epimerase | |||
2370 | DUF2556 family protein | |||
2375 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen58631ORF2375P |
2380 | DNA-binding transcriptional regulator Fis | |||
9220 | phosphohydrolase | |||
9225 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen58631DcmP |
9230 | V | V.StyTDcmP (100% identity) | V.Sen58631DcmP | |
9235 | drug/metabolite exporter YedA | |||
14305 | YqaJ viral recombinase family protein | |||
??? | M | M.SenS321ORF16155P (100% identity) | GATC | M.Sen58631ORF14310P |
14315 | DUF4060 family protein | |||
19770 | YebC/PmpR family DNA-binding transcriptional | |||
19775 | R | Sens12373ORF19550P (100% identity) | Sen58631ORF19775P | |
19780 | fosfomycin resistance glutathione transferase | |||
19800 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen58631ORF19800P |
19805 | DEAD/DEAH box helicase | |||
plasmid p58631 | ||||
23310 | 106 aa hypothetical protein | |||
23315 | M | M.Ssp15303ORFDP (100% identity) | M.Sen58631ORF23315P | |
23320 | 202 aa hypothetical protein | |||
23440 | DNA-binding protein | |||
23445 | M | M.Ssp15303ORFEP (100% identity) | M.Sen58631ORF23445P | |
23450 | 284 aa hypothetical protein | |||
24350 | 55 aa hypothetical protein | |||
24355 | M | M.Ssp15303DcmP (100% identity) | M.Sen58631Dcm2P | |
24360 | thermonuclease family protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17375 | 33 aa hypothetical protein | |||
17380 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen58631ORF17385P |
17385 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen58631ORF17385P |
17390 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19625 | BrnT family toxin | |||
19630 | R | StyUK1MrrP (100% identity) | Sen58631MrrP | |
19635 | type I restriction-modification system |