Escherichia coli AH01 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli AH01 RM systems
Ref: Yin,D. unpublished
REBASE ref # 29305
| Sequence length: | GenBank #: | |
| Chromosome: | 4,886,157 bp | CP055251 |
| plasmid pAH01-1: | 46,914 bp | CP055252 |
| plasmid pAH01-3: | 71,937 bp | CP055254 |
REBASE acronym: EcoAH01
Org_num: 41464
All begin HUU83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2230 | endoribonuclease SymE | |||
| 2235 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoAH01ORF2240P |
| 2240 | M | M.SspS13ORF3945P (99% identity) | CCANNNNNNNNNTTGG | M.EcoAH01ORF2240P |
| 2245 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoAH01ORF2240P |
| 2250 | 322 aa hypothetical protein | |||
| 19200 | transposase domain-containing protein | |||
| 19205 | M | M.SenSI170ORF3660P (100% identity) | M.EcoAH01ORF19205P | |
| 19210 | AAA family ATPase | |||
| 19215 | S | S2.SenSI170ORF3660P (100% identity) | S.EcoAH01ORF19205P | |
| 19220 | R | SenSI170ORF3660P (100% identity) | EcoAH01ORF19205P | |
| 19225 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1995 | DEAD/DEAH box helicase family protein | |||
| 2000 | M | M.EcofEC1ORF1985P (100% identity) | M.EcoAH01ORF2000P | |
| 2005 | DUF3780 domain-containing protein | |||
| 2500 | PerC family transcriptional regulator | |||
| 2505 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoAH01ORF2505P |
| 2510 | LexA family transcriptional regulator | |||
| 2540 | 67 aa hypothetical protein | |||
| 2545 | M | M.Sso63633ORF22290P (100% identity) | M.EcoAH01ORF2545P | |
| 2550 | phage lysis protein EssD | |||
| 6750 | recombination protein NinB | |||
| 6755 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoAH01ORF6755P |
| 6760 | NinE family protein | |||
| 8880 | PerC family transcriptional regulator | |||
| 8885 | M | M.EcofEC1ORF8685P (100% identity) | GATC | M.EcoAH01ORF8885P |
| 8890 | LexA family transcriptional regulator | |||
| 13410 | drug/metabolite exporter YedA | |||
| 13415 | V | V.SflFF64DcmP (100% identity) | V.EcoAH01DcmP | |
| 13420 | M | M.EcosEC71DcmP (99% identity) | CCWGG | M.EcoAH01DcmP |
| 13425 | phosphohydrolase | |||
| 20135 | DNA-binding transcriptional regulator Fis | |||
| 20140 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoAH01ORF20140P |
| 20145 | DUF2556 family protein | |||
| 20665 | ribulose-phosphate 3-epimerase | |||
| 20670 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoAH01DamP |
| 20675 | cell division protein DamX | |||
| plasmid pAH01-1 | ||||
| 23755 | 90 aa hypothetical protein | |||
| 23760 | M | M.EcoC0942ORF24515P (100% identity) | M.EcoAH01ORF23760P | |
| 23765 | 75 aa hypothetical protein | |||
| plasmid pAH01-3 | ||||
| 24360 | 97 aa hypothetical protein | |||
| 24365 | M | M.Xca80ORFEP (99% identity) | M.EcoAH01ORF24365P | |
| 24370 | 73 aa hypothetical protein | |||