Shigella flexneri FDAARGOS_714 |
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Putative Shigella flexneri FDAARGOS_714 RM systems
Ref: Fashae,K. et al. unpublished
REBASE ref # 29149
Complete sequence: 4,733,599 bp
GenBank #: CP055124
REBASE acronym: Sfl714
Org_num: 41220
All begin FOC22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7640 | 238 aa hypothetical protein | |||
| 7645 | S | S.Sfl60ORF5715P (98% identity) | GGANNNNNNCTTT | S.Sfl714ORF7650P |
| 7650 | M | M.Sfl60ORF5715P (100% identity) | GGANNNNNNCTTT | M.Sfl714ORF7650P |
| 7655 | R | Sfl60ORF5715P (100% identity) | GGANNNNNNCTTT | Sfl714ORF7650P |
| 7660 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2090 | DNA-binding transcriptional regulator Fis | |||
| 2095 | M | M.Sfl60ORF11285P (100% identity) | ATGCAT | M.Sfl714ORF2095P |
| 2100 | DUF2556 family protein | |||
| 2685 | ribulose-phosphate 3-epimerase | |||
| 2690 | M | M.UbaC1152DamP (100% identity) | GATC | M.Sfl714DamP |
| 2695 | cell division protein DamX | |||
| 7690 | 59 aa hypothetical protein | |||
| 7695 | R | Sfl60ORF5670P (100% identity) | Sfl714ORF7695P | |
| 7700 | HNH endonuclease | |||
| 12330 | IS3 family transposase | |||
| 12335 | M | M.Sfl60ORF930P (100% identity) | M.Sfl714ORF12335P | |
| 12340 | replication endonuclease | |||
| 14280 | phosphohydrolase | |||
| 14285 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Sfl714DcmP |
| 14290 | V | V.SsoST152DcmP (100% identity) | V.Sfl714DcmP | |
| 14295 | drug/metabolite exporter YedA | |||
| 18395 | DUF1737 domain-containing protein | |||
| 18415 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Sfl714ORF18415P |
| 18420 | 79 aa hypothetical protein | |||
| 19230 | 25 aa hypothetical protein | |||
| 19235 | M | M.Sfl59ORF3880P (100% identity) | M.Sfl714ORF19235P | |
| 19240 | IS1 family transposase | |||