Escherichia coli YJ3 |
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Putative Escherichia coli YJ3 RM systems
Ref: Sugawara,Y. et al. unpublished
REBASE ref # 30654
| Sequence length: | GenBank #: | |
| Chromosome: | 4,823,608 bp | AP023226 |
| plasmid pYJ3-a: | 170,909 bp | AP023228 |
REBASE acronym: EcoYJ3
Org_num: 40988
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | EcoYJ4ORFDP (100% identity) | EcoYJ3ORFBP | |
| ??? | R | EcotcmA3ORF16550P (100% identity) | EcoYJ3ORFEP | |
| ??? | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoYJ3ORFEP | |
| ??? | M | M.Pre393ORF2750P (100% identity) | M.EcoYJ3ORFEP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoYJ3DamP |
| ??? | M | M.Sso8ORF2545P (99% identity) | ATGCAT | M.EcoYJ3ORFAP |
| ??? | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoYJ3DcmP |
| ??? | V | V.EcosEC7DcmP (100% identity) | V.EcoYJ3DcmP | |
| ??? | RM | SenC1328ORFDP (100% identity) | EcoYJ3ORFCP | |
| ??? | R | SflSTLE4ORF19250P (100% identity) | EcoYJ3ORFDP | |
| ??? | R | EcoVEF5ORF39400P (100% identity) | EcoYJ3ORFFP | |
| ??? | M | M.Sso63633ORF22290P (100% identity) | M.EcoYJ3ORFHP | |
| plasmid pYJ3-a | ||||
| ??? | M | M.KpnVA569ORF28145P (100% identity) | M.EcoYJ3ORFGP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | SflSTLE4McrCP (100% identity) | EcoYJ3McrCP | |
| ??? | R | EcoA50McrBP (100% identity) | EcoYJ3McrBP | |