Vibrio cholerae W6G |
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Putative Vibrio cholerae W6G RM systems
Ref: Drebes Doerr,N.C. and Blokesch,M. unpublished
REBASE ref # 30771
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,967,360 bp | CP053810 |
| plasmid pW6G: | 306,484 bp | CP053812 |
REBASE acronym: VchW6G
Org_num: 41406
All begin HPY05_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1335 | AAA family ATPase | |||
| 1340 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchW6GDamP |
| 1345 | ribulose-phosphate 3-epimerase | |||
| 10070 | restriction endonuclease | |||
| 10075 | M | M.VchW7GDndAP (100% identity) | M.VchW6GDndAP | |
| 10080 | DNA sulfur modification protein DndB | |||
| 10075 | cysteine desulfurase DndA | |||
| 10080 | M | M.VchW7GDndBP (99% identity) | M.VchW6GDndBP | |
| 10085 | DNA phosphorothioation system sulfurtransferase | |||
| 10080 | DNA sulfur modification protein DndB | |||
| 10085 | M | M.VchW7GDndCP (100% identity) | M.VchW6GDndCP | |
| 10090 | DNA sulfur modification protein DndD | |||
| 10085 | DNA phosphorothioation system sulfurtransferase | |||
| 10090 | M | M.VchW7GDndDP (100% identity) | M.VchW6GDndDP | |
| 10095 | DNA sulfur modification protein DndE | |||
| 10090 | DNA sulfur modification protein DndD | |||
| 10095 | M | M.VchW7GDndEP (100% identity) | M.VchW6GDndEP | |
| 10100 | 114 aa hypothetical protein | |||
| 10105 | 548 aa hypothetical protein | |||
| 10110 | R | VchW7GDptHP (100% identity) | VchW6GDptHP | |
| 10115 | DNA phosphorothioation-dependent restriction | |||
| 10110 | DNA phosphorothioation-dependent restriction | |||
| 10115 | R | VchW7GDptGP (100% identity) | VchW6GDptGP | |
| 10120 | DNA phosphorothioation-dependent restriction | |||
| 10115 | DNA phosphorothioation-dependent restriction | |||
| 10120 | R | VchW7GDptFP (100% identity) | VchW6GDptFP | |
| 10125 | 170 aa hypothetical protein | |||
| plasmid pW6G | ||||
| 19965 | 111 aa hypothetical protein | |||
| 19970 | M | M.VchW7GORF19775P (100% identity) | M.VchW6GORF19970P | |
| 19975 | Tn3 family transposase | |||
| 20630 | 271 aa hypothetical protein | |||
| 20635 | M | M.VchW7GORF20440P (100% identity) | M.VchW6GORF20635P | |
| 20640 | ATP-dependent helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pW6G | ||||
| 20210 | 80 aa hypothetical protein | |||
| 20215 | M | M.VchW7GORF20020P (100% identity) | M.VchW6GORF20215P | |
| 20220 | R | VchW7GORF20020P (100% identity) | VchW6GORF20215P | |
| 20225 | 82 aa hypothetical protein | |||