Vibrio cholerae E7G |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio cholerae E7G RM systems
Ref: Drebes Doerr,N.C. and Blokesch,M. unpublished
REBASE ref # 30771
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,000,460 bp | CP053822 |
| chromosome 2: | 1,199,805 bp | CP053823 |
| plasmid pE7G: | 80,726 bp | CP053824 |
REBASE acronym: VchE7G
Org_num: 41390
All begin HPY10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 8865 | AAA family ATPase | |||
| 8870 | S | S.VchSA7GORF8835P (100% identity) | S.VchE7GORF8875P | |
| 8875 | M | M.VchSA7GORF8835P (100% identity) | M.VchE7GORF8875P | |
| 8880 | multidrug transporter | |||
| 8885 | R | VchSA7GORF8835P (100% identity) | VchE7GORF8875P | |
| 8890 | 175 aa hypothetical protein | |||
| 9935 | 122 aa hypothetical protein | |||
| 9940 | R | VchSA7GORF9910P (100% identity) | VchE7GORF9950P | |
| 9945 | S | S.VchSA7GORF9910P (100% identity) | S.VchE7GORF9950P | |
| 9950 | M | M.VchSA7GORF9910P (100% identity) | M.VchE7GORF9950P | |
| 9955 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1370 | AAA family ATPase | |||
| 1375 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchE7GDamP |
| 1380 | ribulose-phosphate 3-epimerase | |||
| 12975 | restriction endonuclease | |||
| 12980 | M | M.VchSA7GORF12940P (100% identity) | M.VchE7GORF12980P | |
| 12985 | MarR family transcriptional regulator | |||
| 13460 | recombinase family protein | |||
| 13465 | M | M.VchSA7GORF13425P (100% identity) | M.VchE7GORF13465P | |
| 13470 | R | VchSA7GORF13425P (100% identity) | VchE7GORF13465P | |
| 13475 | 178 aa hypothetical protein | |||
| chromosome 2 | ||||
| 15285 | DUF645 family protein | |||
| 15290 | M | M.VchSA7GORF15145P (100% identity) | M.VchE7GORF15290P | |
| 15295 | R | VchSA7GORF15145P (100% identity) | VchE7GORF15290P | |
| 15300 | helix-turn-helix transcriptional regulator | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pE7G | ||||
| 20055 | 78 aa hypothetical protein | |||
| 20060 | M | M.Vvu48ORFAP (99% identity) | M.VchE7GORF20060P | |
| 20065 | 122 aa hypothetical protein | |||