Vibrio cholerae SA10G |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio cholerae SA10G RM systems
Ref: Drebes Doerr,N.C. and Blokesch,M. unpublished
REBASE ref # 30771
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,010,605 bp | CP053820 |
| chromosome 2: | 1,166,701 bp | CP053821 |
REBASE acronym: VchSA10G
Org_num: 41396
All begin HPY11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 8815 | 227 aa hypothetical protein | |||
| 8820 | R | Vch352303ORFAP (100% identity) | VchSA10GORF8830P | |
| 8825 | S | S.Vch352303ORFAP (100% identity) | S.VchSA10GORF8830P | |
| 8830 | M | M.Vch352303ORFAP (100% identity) | M.VchSA10GORF8830P | |
| 8835 | GIY-YIG nuclease family protein | |||
| 9900 | helix-turn-helix transcriptional regulator | |||
| 9905 | R | Vch10432ORF1460P (97% identity) | VchSA10GORF9920P | |
| 9910 | restriction endonuclease subunit S | |||
| 9915 | S | S.Abe9722ORF11970P (27% identity) | S.VchSA10GORF9920P | |
| 9920 | M | M.VchSA7GORF9910P (98% identity) | M.VchSA10GORF9920P | |
| 9925 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1475 | AAA family ATPase | |||
| 1480 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchSA10GDamP |
| 1485 | ribulose-phosphate 3-epimerase | |||
| 10145 | transcriptional regulator | |||
| 10150 | RM | SmaQE13ORF46550P (72% identity) | VchSA10GORF10150P | |
| 10155 | tyrosine-type recombinase/integrase | |||
| 13025 | restriction endonuclease | |||
| 13030 | M | M.VchSA7GORF12940P (100% identity) | M.VchSA10GORF13030P | |
| 13035 | MarR family transcriptional regulator | |||
| 13510 | recombinase family protein | |||
| 13515 | M | M.VchSA7GORF13425P (100% identity) | M.VchSA10GORF13515P | |
| 13520 | R | VchSA7GORF13425P (100% identity) | VchSA10GORF13515P | |
| 13525 | 311 aa hypothetical protein | |||
| chromosome 2 | ||||
| 14500 | GMP reductase | |||
| 14505 | M | M.VchSL6YORF14055P (100% identity) | M.VchSA10GORF14505P | |
| 14510 | ATP-binding protein | |||
| 14505 | DNA cytosine methyltransferase | |||
| 14510 | R | VpaBM25ORF9200P (92% identity) | VchSA10GORF14510P | |
| 14515 | 607 aa hypothetical protein | |||