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Putative Helicobacter suis NHP19-4022 RM systems
Ref: Suzuki,M. and Rimbara,E. unpublished
REBASE ref # 30607
Complete sequence: 1,670,524 bp
GenBank #: AP023046
REBASE acronym: Hsu4022
Org_num: 40993
All begin NHP194022_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4600 | 3-deoxy-D-manno-octulosonate 8-phosphate | |||
??? | R | Hsu101cORF7690P (100% identity) | Hsu4022ORF4640P | |
4630 | S | S.Hsu0020ORF6320P (100% identity) | S.Hsu4022ORF4640P | |
4640 | M | M.Hsu101cORF7690P (99% identity) | M.Hsu4022ORF4640P | |
4650 | Outer membrane protein | |||
7830 | 82 aa hypothetical protein | |||
7840 | S | S.Hsu101cORF9840P (98% identity) | S.Hsu4022ORF7850P | |
??? | M | Hpy4004ORF11330P (100% identity) | M.Hsu4022ORF7850P | |
7870 | S-ribosylhomocysteine lyase LuxS | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1190 | 85 aa hypothetical protein | |||
??? | M | M.Hsu101cORF1200P (100% identity) | M.Hsu4022ORF1200P | |
1220 | 287 aa hypothetical protein | |||
1350 | selenocysteine-specific translation elongation | |||
1360 | M | M.HsuHS1ORF1490P (100% identity) | M.Hsu4022ORF1360P | |
1370 | 299 aa hypothetical protein | |||
1400 | Glucose-6-phosphate isomerase Pgi | |||
1410 | RM | Hpy4004ORF1390P (99% identity) | Hsu4022ORF1410P | |
1420 | 67 aa hypothetical protein | |||
2170 | 1-deoxy-D-xylulose-5-phosphate synthase Dxs | |||
??? | M | M.Hsu0020ORF2980P (100% identity) | M.Hsu4022ORF2180P | |
2200 | 640 aa hypothetical protein | |||
2240 | ABC transporter ATP-binding protein YheS | |||
2250 | R | Hsu0020ORF2900P (99% identity) | Hsu4022ORF2260P | |
2260 | M | M.Hsu101cORF2250P (99% identity) | M.Hsu4022ORF2260P | |
2270 | Phosphatidylglycerophosphatase A PgpA | |||
2840 | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | |||
2850 | M | M.Hsu101cORF2840P (100% identity) | M.Hsu4022ORF2850P | |
2860 | R | Hsu101cORF2840P (99% identity) | Hsu4022ORF2850P | |
2870 | 256 aa hypothetical protein | |||
4030 | 39 aa hypothetical protein | |||
4040 | M | M.HsuHS1ORF4820P (100% identity) | M.Hsu4022ORF4040P | |
4050 | 467 aa hypothetical protein | |||
4330 | 239 aa hypothetical protein | |||
4340 | R | Hsu101cORF7400P (100% identity) | Hsu4022ORF4350P | |
??? | M | M.Hsu101ORFYP (100% identity) | M.Hsu4022ORF4350P | |
4360 | 154 aa hypothetical protein | |||
4490 | methyl-accepting chemotaxis sensory transducer | |||
4500 | RM | HsuHS1ORF9820P (100% identity) | Hsu4022ORF4500P | |
4510 | S | S.Hpy4004ORF4400P (97% identity) | S.Hsu4022ORF4500P | |
4520 | 68 aa hypothetical protein | |||
4910 | Shikimate kinase AroK | |||
4930 | M | M1.HsuHS1ORF9300P (100% identity) | M1.Hsu4022ORF4930P | |
4940 | M | M2.HsuHS1ORF9300P (100% identity) | M2.Hsu4022ORF4930P | |
4950 | R | HsuHS1ORF9300P (100% identity) | Hsu4022ORF4930P | |
4960 | Phosphotransacetylase | |||
9460 | Shikimate 5-dehydrogenase | |||
9470 | M | M.HsuHS1ORF7680P (100% identity) | M.Hsu4022ORF9470P | |
??? | R | Hsu0020ORF16410P (100% identity) | Hsu4022ORF9470P | |
9490 | DNA polymerase III subunit delta HolA | |||
11320 | 109 aa hypothetical protein | |||
11330 | M | M.Hsu0020ORF14580P (100% identity) | M.Hsu4022ORF11330P | |
11340 | NADPH dehydrogenase | |||
15940 | Fumarate hydratase FumC | |||
15950 | M | M.HsuHS1ORF3730P (100% identity) | M.Hsu4022ORF15950P | |
15960 | 193 aa hypothetical protein | |||
16440 | 766 aa hypothetical protein | |||
??? | M | M.Hsu0020ORF1570P (100% identity) | M.Hsu4022ORF16450P | |
16470 | 110 aa hypothetical protein | |||
16800 | 190 aa hypothetical protein | |||
??? | R | Hsu0020ORF17560P (100% identity) | Hsu4022ORF16820P | |
16820 | M | M.HsuHS1ORF18000P (100% identity) | M.Hsu4022ORF16820P | |
16830 | Molybdopterin-guanine dinucleotide biosynthesis | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1050 | HIT family protein | |||
1060 | M | M.Hpy4004ORF1060P (100% identity) | M.Hsu4022ORF1060P | |
1070 | 97 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
8480 | 118 aa hypothetical protein | |||
8490 | R | Hsu0020McrBP (99% identity) | Hsu4022McrBP | |
8500 | R | HsuHS1McrCP (100% identity) | Hsu4022McrCP | |
8510 | Alginate_lyase domain-containing protein |