Ralstonia solanacearum FJAT1303.F50 |
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Putative Ralstonia solanacearum FJAT1303.F50 RM systems
Ref: Zheng,X. unpublished
REBASE ref # 29240
| Sequence length: | GenBank #: | |
| Chromosome: | 3,854,510 bp | CP052126 |
| plasmid Plas1: | 1,975,651 bp | CP052127 |
REBASE acronym: Rso03F50
Org_num: 40956
All begin HI793_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 340 | Rrf2 family transcriptional regulator | |||
| 345 | M | M.RsoF8ORF345P (100% identity) | M.Rso03F50ORF345P | |
| ??? | R | RsoWR1ORFKP (100% identity) | Rso03F50ORF345P | |
| 360 | sensor histidine kinase | |||
| 13955 | purine nucleoside permease | |||
| 13960 | M | M.RsoF8ORF13950P (100% identity) | M.Rso03F50ORF13960P | |
| 13965 | S | S1.RsoF8ORF13950P (100% identity) | S1.Rso03F50ORF13960P | |
| 13970 | DUF1016 domain-containing protein | |||
| 13975 | R | RsoF8ORF13950P (100% identity) | Rso03F50ORF13960P | |
| 13980 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1205 | type II toxin-antitoxin system RelE/ParE family | |||
| 1210 | M | M1.RsoF8ORF1210P (100% identity) | M1.Rso03F50ORF1210P | |
| 1215 | M | M2.RsoF8ORF1210P (100% identity) | M2.Rso03F50ORF1210P | |
| 1220 | 121 aa hypothetical protein | |||
| 1320 | type III secretion system YopJ family effector | |||
| 1325 | M | M.RsoRS24ORF1185P (100% identity) | M.Rso03F50ORF1325P | |
| 1330 | phage tail tape measure protein | |||
| 1435 | 547 aa hypothetical protein | |||
| 1440 | R | RsoF8ORF1440P (100% identity) | Rso03F50ORF1445P | |
| 1445 | M | M.RsoF8ORF1445P (100% identity) | M.Rso03F50ORF1445P | |
| 1450 | 159 aa hypothetical protein | |||
| 3340 | helix-turn-helix domain-containing protein | |||
| 3345 | M | M.RsoF8ORF3345P (100% identity) | M.Rso03F50ORF3345P | |
| 3350 | V | V.RsoF8ORF3345P (100% identity) | V.Rso03F50ORF3345P | |
| 3355 | DEAD/DEAH box helicase | |||
| 3360 | restriction endonuclease | |||
| 3365 | RM | RsoF8ORF3365P (100% identity) | Rso03F50ORF3365P | |
| 3370 | IS5-like element IS1420 family transposase | |||
| 3370 | IS5-like element IS1420 family transposase | |||
| 3375 | R | Ssp0042ORF6280P (91% identity) | Rso03F50ORF3375P | |
| 3380 | helicase | |||
| 7840 | tryptophan synthase subunit beta | |||
| 7845 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.Rso03F50ORF7845P |
| 7850 | tryptophan synthase subunit alpha | |||
| 11955 | Com family DNA-binding transcriptional | |||
| 11960 | M | M.RsoT78ORF11670P (100% identity) | M.Rso03F50ORF11960P | |
| 11965 | 122 aa hypothetical protein | |||
| 13455 | 408 aa hypothetical protein | |||
| 13460 | M | M.Rsp650ORF13560P (100% identity) | M.Rso03F50ORF13460P | |
| 13465 | H-NS histone family protein | |||
| 13585 | DUF86 domain-containing protein | |||
| 13590 | M | M2.Rsp647ORF4655P (100% identity) | M1.Rso03F50ORF13590P | |
| 13595 | M | M2.Rsp650ORF13700P (100% identity) | M2.Rso03F50ORF13590P | |
| 13600 | 135 aa hypothetical protein | |||
| plasmid Plas1 | ||||
| 20800 | mannose-binding lectin protein | |||
| 20805 | M | M.RsoWR1ORFAP (100% identity) | M.Rso03F50ORF20805P | |
| 20810 | site-specific DNA-methyltransferase | |||