Ralstonia solanacearum FJAT15252.F50 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Ralstonia solanacearum FJAT15252.F50 RM systems
Ref: Zheng,X. unpublished
REBASE ref # 29240
| Sequence length: | GenBank #: | |
| Chromosome: | 3,984,237 bp | CP052102 |
| plasmid Plas1: | 2,075,688 bp | CP052103 |
REBASE acronym: Rso52F50
Org_num: 40903
All begin HI806_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 215 | Rrf2 family transcriptional regulator | |||
| 220 | M | M.RsoYQORF285P (100% identity) | M.Rso52F50ORF220P | |
| ??? | R | RsoT78ORF205P (100% identity) | Rso52F50ORF220P | |
| 235 | sensor histidine kinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 20 | M | M.Rsp647ORF20P (100% identity) | M.Rso52F50ORF20P | |
| 25 | ATP-binding protein | |||
| 1090 | type II toxin-antitoxin system RelE/ParE family | |||
| 1095 | M | M2.Rsp650ORF25990P (100% identity) | M1.Rso52F50ORF1095P | |
| 1100 | M | M1.Rsp647ORF16520P (100% identity) | M2.Rso52F50ORF1095P | |
| 1105 | IS5-like element IS1405 family transposase | |||
| 1220 | type III secretion system YopJ family effector | |||
| 1225 | M | M.Rsp650ORF25870P (100% identity) | M.Rso52F50ORF1225P | |
| 1230 | phage tail tape measure protein | |||
| 2210 | Com family DNA-binding transcriptional | |||
| 2215 | M | M.Rso63F50ORF2225P (100% identity) | M.Rso52F50ORF2215P | |
| 2220 | 143 aa hypothetical protein | |||
| 7650 | tryptophan synthase subunit beta | |||
| 7655 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.Rso52F50ORF7655P |
| 7660 | tryptophan synthase subunit alpha | |||
| 7985 | Com family DNA-binding transcriptional | |||
| 7990 | M | M.RsoT02ORFAP (100% identity) | M.Rso52F50ORF7990P | |
| 7995 | zinc ribbon domain-containing protein | |||
| 9100 | 120 aa hypothetical protein | |||
| 9105 | M | M.RsoF501ORFAP (87% identity) | M.Rso52F50ORF9105P | |
| 9110 | 79 aa hypothetical protein | |||
| 12420 | Com family DNA-binding transcriptional | |||
| 12425 | M | M.RsoT78ORF11670P (100% identity) | M.Rso52F50ORF12425P | |
| 12430 | 122 aa hypothetical protein | |||
| 14190 | 408 aa hypothetical protein | |||
| 14195 | M | M.Rsp650ORF13560P (100% identity) | M.Rso52F50ORF14195P | |
| 14200 | H-NS histone family protein | |||
| 14320 | DUF86 domain-containing protein | |||
| 14325 | M | M2.Rsp647ORF4655P (100% identity) | M1.Rso52F50ORF14325P | |
| 14330 | M | M2.Rsp650ORF13700P (100% identity) | M2.Rso52F50ORF14325P | |
| 14335 | 135 aa hypothetical protein | |||
| plasmid Plas1 | ||||
| 21880 | mannose-binding lectin protein | |||
| 21885 | M | M.RsoF501ORFPP (100% identity) | M1.Rso52F50ORF21885P | |
| ??? | M | M2.Rso63F50ORF21890P (100% identity) | M2.Rso52F50ORF21885P | |
| 21900 | type III secretion system effector protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 105 | 85 aa hypothetical protein | |||
| 110 | R | RsoF501MrrP (92% identity) | Rso52F50MrrP | |
| 115 | aminotransferase class I/II-fold pyridoxal | |||